Brassica napus (rape): 125597648
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Entry
125597648 CDS
T04128
Name
(RefSeq) formamidopyrimidine-DNA glycosylase-like isoform X1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bna
Brassica napus (rape)
Pathway
bna03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125597648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bna03400
]
125597648
Enzymes [BR:
bna01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
125597648
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
125597648
DNA repair and recombination proteins [BR:
bna03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
125597648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
Fpg-like_C
NFACT_N
COMM_HN
Ribosomal_S13
DDHD
Motif
Other DBs
NCBI-GeneID:
125597648
NCBI-ProteinID:
XP_048628211
LinkDB
All DBs
AA seq
412 aa
AA seq
DB search
MPELPEVEAARRAIADNCVGKKIKRVLIADDNKVIDGISPSDFQKSVLGKTIVCARRKGK
NLWLELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDGLEL
SFTDKRRFAKVRLLENVLTLILLAFFTKLDLVVGMFVLLQPVSVRPISELGPDALLEPMT
VDEFAKSLAKKKITIKPLLLDQGFISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALH
TSIKEVIEKAVEVDAESSQFPSNWIFHAREEKPGKAFVDGKKIDFITAGGRTTAYVPELQ
KLSGKDAEKAAKAKPAKRGGAKSKEDDEEEELEKEDDSAKPKNQKPKGRGKKPALKRKTK
DSEDEDDDADGEEDESDAEEEVVKPRGRGTKAAIKKKPEEKAGNKKPKGRRS
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgccagagctgccggaggtagaggcggcgaggagagcgatagcggataactgtgtcggg
aagaagatcaagcgagtcctcatcgccgacgacaacaaagtgatcgatggaatctcgccc
tccgatttccagaagtcagtcctcgggaaaaccatcgtctgtgctcgtaggaagggcaaa
aacctctggctcgagttggattctccgcccttcccttctttccaattcggtatggctggt
gctatctacatcaaaggcgttgctgttactaaatataaaaggtctgctgttaaggattca
gaggagtggccttctaagtactctaagttctttgttgagcttgatgatggtttagagctt
tcatttactgacaagaggagatttgccaaagttcggcttttggaaaatgtattaactctt
atcttgcttgctttctttactaagcttgatcttgtggttgggatgtttgtgctattgcag
cccgtttctgtgcgtccaatatcagagcttggtcctgatgcattgttggagcctatgaca
gttgatgaatttgccaaaagcttagctaaaaagaaaataaccatcaaacctctcctactt
gatcagggtttcatttcaggtattgggaactggattgccgatgaagttctgtaccaagca
agaatccacccattgcagactgcttctagcctctccaaagagcaatgtgaagccttgcac
acatccatcaaagaggtgatagaaaaagctgtggaagttgatgcagagagtagtcagttt
cctagtaactggatttttcatgctagggaagagaagccaggaaaagcttttgttgatggg
aagaagattgatttcatcactgctggtggaaggacaacagcttatgtcccagagctgcag
aaactctctgggaaagatgcggagaaagcagccaaggctaaaccggctaaaaggggtggt
gcaaaatcaaaagaagacgatgaagaagaagaattggagaaagaagatgatagtgctaaa
ccgaagaatcaaaaacctaaaggtcgtggtaagaagcctgcactgaaaagaaaaacaaaa
gatagtgaggatgaggacgatgatgctgatggtgaagaagatgaaagtgacgctgaagag
gaagttgtgaaacccagaggccgtggtacgaaggctgcgattaagaagaaacctgaagag
aaagctggtaacaagaagccgaagggaaggagaagttaa
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integrated database retrieval system
