Brassica napus (rape): 125598874
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Entry
125598874 CDS
T04128
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic-like isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bna01009
]
125598874
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
125598874
Protein phosphatases and associated proteins [BR:
bna01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125598874
Membrane trafficking [BR:
bna04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
125598874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
125598874
NCBI-ProteinID:
XP_048628570
LinkDB
All DBs
AA seq
1029 aa
AA seq
DB search
MDSHPSLTGRSIGNSNRSSLDLGHSSSSSHSSLTKSISDASSQSLSSILNNPHVGKSGVY
GTDASWVGWWSSSSTSVSPSEFSPVASAKLPGSDLTRSDFNTYISSISDSHNRFEDIINH
TKEEESSELDQERHVSGLASCLREVPSLYFKEDFALEDGATFRSACPFSSLNENLALQEK
LSQYLDVVEMHLVKEISVRSDSFFEAQGQLEDLNVKIVEGCRRIRDLKETIRVIDRSLVD
SARRIQELSSTRVNMLELQRKLRVILYVNQALTALKLFVASADCAGALDITDDLQNLLAG
DELTGLHCFRHLRDHVTISIDSINSILTAEFMRISIHNTGEIDVLILSSAKKRGSISSNG
ETGDEVKLEEEDTSTLCDRLLPLVIGLLRTAKFPSILRMYREALTSEMKNAIKNAVAELL
PILVARSLESDFSHGERSVDVDGGGLSLASKLRTLSSEAFVNLLTAIFRIVQAHLVRASE
VKKAIEWILCNIDGHYAADSVAAAIAVGAVAAESAQESGFQSGQLVSSPLGSLTSKTPSL
QRKSSDATNLMNMSRNFRADVLRENTEAVFAACEVTHARWAKLLGVRALLHPKLKLQEFM
SIYDLTQEFITVTEKIGGRLGSSIRGTLQSQAKAFVDSQHEARMTKLKAVLDQETWDEID
VPEEFQSIISSLFASQELISGKGDDADIKTHRNPLPLNGSLTSGTEDQSTESRNEKSESS
EGAAVSNAQVKSTVKASVSSVTNNQSNQKAHGKSNLFYQGVGYHMVNCGLILLKMLSEYI
DMNNSLPALSSEIVLRVVEVLRFFNTRTCQLVLGAGAMQVSGLKSIKAKHLALASQVIDF
TYTIIPESRRIMFSKVPEARKPLLSVDIDKVAQDYRVHRDEIYTKLVQIMRERLLAHLHG
LPKVVEGWNRPPDTNKQTKEFAWPLTREVGYLHRVLSETLHEADVQAIFRQVILIIHTQT
SQTLANLEISSPEAKKRLKLHVELILKCIRSLPSDNTNQPGIPNWGQLDEFFAQHFREEE
EEEGGGQAE
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggattcgcacccttccttaaccggaaggtccatcggaaacagcaaccgatccagctta
gatctcggccactcttcctcttcatcacattcatccttaaccaaatcgatctcggacgca
agcagccaaagcctctcctcgatcctcaacaacccgcacgtaggcaaatccggcgtctac
ggcaccgacgcctcctgggtcggctggtggtcatcctcctcaacctccgtatccccctcc
gagttctcccccgtcgcctccgcaaagctccccggctcggacctaaccagatccgacttc
aacacctacatctcctcgatctccgactcccacaacagattcgaagatatcataaaccac
acaaaagaagaagagagctccgagctcgatcaggagcgccacgtgtccggtttagcttcc
tgcctccgcgaggtcccttcgctctacttcaaggaggatttcgcgttagaggacggggct
acattccgctccgcgtgccccttctcgagcttgaacgagaatctagcgcttcaggagaag
ttatcgcagtatctcgacgtcgttgagatgcatctcgtgaaggagatctcggtgaggtct
gattcgttcttcgaggcgcagggacagctggaggatttgaatgtgaagatcgtcgagggc
tgtaggaggatccgtgacttgaaagagacgattcgggtgatcgataggagtttggtggat
tcggcgaggcggattcaggagctgagctcgactagggttaatatgttggagctgcagcgt
aaattgagggttattttgtatgttaaccaagctctcactgcactcaaattgtttgttgcg
tctgcagattgtgctggggctttggatataactgacgatctccagaacttgttggctgga
gatgagctgactggtctacattgcttccgtcatcttcgtgatcatgttactatttccatt
gattctataaacagtattctcacagcagaatttatgcgtatctcaatacacaatactggg
gaaatagatgtactgattttatcgtcagcaaaaaaacggggatccatttcatctaatggg
gagaccggtgatgaagttaagctagaagaagaagatacgtctactttatgtgatcggctt
cttcctctagtaattggattgctaagaacggcaaagttcccctcaattttgaggatgtat
cgtgaggcactaacatctgaaatgaaaaatgcaatcaagaacgcagttgctgagctgctt
ccaattcttgttgcaagatcgctggagtctgacttttcacatggggagcgctcagtagat
gttgatggtggtggcttatctctcgcaagcaagttgaggaccctgtcatcggaggcgttt
gttaatctcttaactgctatatttaggattgttcaggcacatcttgtccgggcttcggaa
gtgaaaaaagcgattgaatggatcctctgcaatatcgatggacattatgcagctgattcc
gttgcagctgcaattgctgttggtgctgtagcggccgaatcagcccaggaatcaggtttc
caaagcggacaattagtgtcttctccattgggtagtcttacctcaaagaccccttcattg
cagagaaaatcaagcgacgcaacaaacttgatgaacatgtcaagaaacttcagggccgat
gtcttgagagaaaacacagaagctgtctttgcggcctgtgaggttactcatgctagatgg
gcaaagctactaggagtccgtgctcttcttcatccaaaattgaaattgcaggagttcatg
agcatttatgatctcacccaagaatttataacagttacggagaagattggcggacggttg
ggatctagtatacgtgggacgctgcaatcacaagccaaagcctttgtagattcccagcat
gaagctcggatgacaaaactaaaagccgtccttgatcaagaaacatgggatgagatagat
gttcccgaagaattccaatccataatcagttcactttttgcatcccaggagttgatttct
gggaaaggtgatgatgctgatattaaaacacacagaaacccgcttcctctcaatgggtct
ctcacttcaggtactgaagatcaaagtactgaatcacgaaatgaaaaatcggaatctagt
gaaggtgctgcagttagtaacgcgcaagtgaaatctacagtcaaggctagtgtatcttct
gttacgaataatcaaagtaatcagaaggcgcacggaaaatctaaccttttctatcaagga
gttggttaccacatggtaaactgcgggttaatattgctcaagatgttgtcagaatacatt
gatatgaacaattctttgccagctttgtcctcggaaattgttcttcgtgttgttgaagtg
ttgagatttttcaacactaggacatgccaacttgttttgggtgctggtgctatgcaggtg
tctggtttgaagtccattaaggcaaaacacttggcgcttgcaagtcaagtaatcgacttc
acttacactattattcctgaatccagaagaattatgttttcaaaagttcctgaggctaga
aagccactattgtcagtagatattgacaaagttgctcaggattatagggttcatcgagat
gaaatatacacaaaactagttcagataatgagagaaaggctattggcgcatcttcatggt
ttgccgaaagttgttgaaggctggaacagaccgccagacaccaacaaacaaactaaagag
tttgcgtggccactcacgagggaagttggttaccttcatcgtgtcttgtccgagacactg
catgaagcggatgtccaagcaatcttcaggcaggtgattttgataattcacacacaaact
tctcaaacgctggccaacttggagataagctctccagaggcaaagaaaaggttgaagctt
catgttgagctcatcctcaaatgcatccgatcgttaccatccgacaataccaatcagcca
ggcatcccaaattgggggcaactagatgaattctttgcacaacactttagagaagaagaa
gaagaagaaggtggcggccaagctgagtaa
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integrated database retrieval system
