Brassica napus (rape): 125602342
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Entry
125602342 CDS
T04128
Name
(RefSeq) protein PAT1 homolog 1-like
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
bna
Brassica napus (rape)
Pathway
bna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125602342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
125602342
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125602342
mRNA degradation factors
5'-3' decay
Decapping complex
125602342
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
125602342
NCBI-ProteinID:
XP_048629980
LinkDB
All DBs
AA seq
785 aa
AA seq
DB search
MERSDSRDLYNFVRSSSDSNSKLFDASQYEFFGQNLDEMSLGGIDDDDVVAPVLGHSATD
DDDEYHLFNKAGEGAGLGSLSDMDDLATTFAKLNRNVTGPKPLGVIGDRGSGSFSRESSS
ATDWTHDTELTNWLDEQDQEANRWSSQPQSSAHSQPLYRTSSYPQQPPPLQHYNSEPIIV
PESTFTSFPPPGSSSQQTSPGSLHRAPSLPTGSQMNFTAPSPLSNSRFHLSGPSHGPHYG
GNLARYASCGPTLGNVVQPHWATDPGLLHGDHSGLLHSLAQQQQLPPRNDLMSQHMMALQ
QRQSYAQLAALQSQLYRSYPSPSRKVSFGGGEVREQHKHKSSHRSRKNKGISQQASDAAS
QKSESGLQFRSKYMTSEEIESILKMQHSNSHSNDPYVNDYYHQARLAKKSSGSRAITHFY
PSQLKDHHHQPKSRNNSSEQHQQQVHVDALGKITLPYIRRPRALLEVDSSSPGLNDQKGS
GKHLEQEPLVAARVTIEDALGVLIDIVDIDRTLQSTRPQDGGAQVKRKRQILLEGLATAL
QLADPFSKTGQKSGLTAKDDVVFLRIATLPKGRKMLTKYIQLLVPGTEITRAVCMAIFRH
LRFLFGGLPSDTLAAETIANLAKTVTVCVQAMDLRALSACLAAVVCSSEQPPLRPIGSSS
GDGASVVLIALLERAAEVVVVPRAVHGSSNDGLWRASFNEFFNLLTKYCRSKYETIRSQN
QGSAADVLELAIKREMPAELLRASLRHTNDDQRNYLLNFGRKPSAVSESASHARGGQINS
ESVMG
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggagagatccgattccagggacctgtacaactttgttcgctcttcctcagattcaaat
agtaagctctttgacgcatctcagtatgagttttttgggcaaaatcttgacgaaatgtca
ttgggaggtattgacgatgacgatgtggtcgctcctgttcttggacattctgctactgat
gatgatgatgagtatcacttgtttaataaagcaggagagggtgcaggtttagggtcatta
tctgacatggatgatcttgccacgacttttgcaaagctaaatagaaatgtcacgggaccc
aaaccccttggcgttattggtgacagaggatctggttccttttcaagagagagttcttct
gccaccgattggactcacgatacagagctcacaaactggttggacgagcaagatcaagag
gctaacagatggtcctcgcagccacagtcatctgctcattcacaacctttatacaggaca
tcctcttaccctcagcagccaccaccgttgcaacactacaatagtgaaccgatcattgta
ccagaatcaactttcacctcctttcccccgccaggcagcagctctcagcagacttcacct
ggaagcctccaccgcgctccttctcttcccaccggttctcagatgaatttcaccgcacct
tccccgctgtcaaactctagatttcatctttcaggaccctcacacgggcctcactatggt
ggtaatttggctagatatgcctcctgtggtcctacccttggtaacgttgtgcaacctcat
tgggccactgatcctggtcttctccacggagatcattctggtttattacatagtctggcg
caacaacaacagttacctcctcgaaatgatcttatgtcgcaacatatgatggctctccag
cagaggcaatcgtatgctcagcttgcagcgctacagtctcagctgtacaggtcttatcca
tcaccatcacgtaaagtctcttttgggggtggtgaagttagggaacaacacaagcataag
tcttctcataggagtcgaaagaacaaaggcatatctcaacaggcatcagacgcagctagt
cagaaaagcgagagtggattgcagtttagatcaaagtacatgacttcagaggaaatagag
agtatactcaagatgcagcactctaattcacacagcaacgatccttatgtcaatgattat
taccaccaagctcgccttgccaagaagtcttctggatctagagcaatcactcacttctac
ccttctcagttgaaagaccaccaccaccaacctaagtcccgtaataatagttctgaacag
catcaacaacaagttcatgtagatgctcttgggaagatcacgcttccttacattcgcagg
ccacgtgccttgcttgaggttgactcttcttctcctggtcttaatgatcaaaagggctca
gggaaacatttggagcaggaaccacttgtggcagctagggttacaattgaagatgctctt
ggagttctcatcgatatagttgacattgacaggactctccaatccacaaggccacaggac
ggaggtgctcaggtcaagcgaaaacgccagatcctcctagaaggattagcgacagcactt
cagcttgctgatcccttcagcaaaaccgggcagaagtcagggctgactgctaaggatgat
gttgtctttctacgtatagctactcttccaaagggtcgaaaaatgcttacaaagtacata
cagcttctagttccaggcactgagattactcgagctgtctgtatggctatattccgccac
ttgaggtttctcttcggcggcttgccttcggatactctagcagcagagacgattgctaat
cttgccaagacagtcacggtctgtgttcaagctatggacctccgagcgctgagtgcttgc
cttgcagctgtggtttgttcttcggagcagccacctctgcgtcctattggaagctcttca
ggcgatggtgcttcagttgtgttgatagctcttctcgagagagctgctgaagtagtggtg
gttcctcgagccgtccatgggagctctaatgatggtctatggagagcctcgtttaatgag
ttcttcaaccttcttacgaaatactgcaggagcaagtatgagacgatccgtagccagaac
caagggagtgcagcggatgttttggagctggcgataaagagagaaatgcccgctgagctt
ttacgtgcgagcctccgtcataccaatgacgaccagaggaactatttgttaaactttggt
cgtaaaccgtcggccgttagtgagtctgcgtcgcatgcaaggggtggtcagatcaactct
gaatctgtgatgggttga
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