Brassica napus (rape): 125605110
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Entry
125605110 CDS
T04128
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bna03016
]
125605110
Enzymes [BR:
bna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
125605110
Transfer RNA biogenesis [BR:
bna03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
125605110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
CSD_RNase_II
Motif
Other DBs
NCBI-GeneID:
125605110
NCBI-ProteinID:
XP_048631063
LinkDB
All DBs
AA seq
800 aa
AA seq
DB search
MMSVRAINGCFIIRTATTGCAPPVSLFRHRIQRLRSSHLREFSKSGLGFPLLRQNTGGGD
APSCSACIHSLVESVSQELESVSRRKRSRISVRASVKVKLTSYGEVVEDKLVNQELEAGL
LLEFKKDPERVLLAVTHRPDGKKNWMVFDQNGVSSSIKPQQITYIVPGLYNFNHTELTDF
LQRAQDNLDTQLLEFAWMELLEKNKPVTPEELAEIIYGRSDPLESYCAHFLLSKDEIYFS
VLESKGSRSIYSPRRTEQVEELLRRQRVKEAEEREFEEFIQLLKSAKNAPSHTKPPKSSW
LANDKVRENIDSLKAYAIDAWASIDQRKVAGVILKSMGLQKTAVSALNLLIDIGYFPVHV
NLDLLKLNLPTDHSDAVVEAAEILLSESSDLDAARRIDLTHLKVYAIDVDEADELDDALS
ATRLQDGRIKIWIHVADPARYVTPGSKVDREARRRGTSVFLPTATYPMFPEKLAMEGMSL
RQGETCNAVSVSVVLRSDGSIAEYSVENSIIRPTYMLTYESAAELLHMNLQEEVELRLLS
EAAFLRSQWRHEQGAVDTTTLETRIKVVNPEDPEPLINLYVENQADPAMRLVFEMMILCG
EVIATFGSQHNIPLPYRGQPQSNIDVSAFAHLPEGPVRSASIVKVMRAAEMNFRCPVRHG
VLGIPGYVQFTSPIRRYMDLTAHYQIKAFLRGGDNFPFSAGELEGIAASVNMQNRVVRKL
CNSGLRYWVIEFLRRQQKGKKYTALILRFVKDRIASLLLVEVGFQATAWVSEGKQVGDEV
EVRVEEAHPRDDLILLKEVL
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcggtgagggcaattaacggttgcttcatcatccgcaccgccaccaccggctgc
gctcctcccgtctctctatttcgccaccgtattcagcgactcagatcgtctcatctccgc
gaattctcgaaatcagggcttggttttcctctactgcgacagaacaccggcggcggcgat
gcaccgagctgctcggcgtgcattcatagcctcgtggaaagtgtttcccaagagctcgaa
tcagtcagcaggcgcaagcgaagccgaatcagcgttcgcgccagtgtcaaggtgaaatta
acaagctacggagaggttgttgaggataagctagtaaaccaagagctagaggcgggtttg
cttctggagttcaagaaggatccagaaagggtgttgttggcagtcactcatagacctgat
ggcaagaagaactggatggtctttgatcagaatggtgtttcttcttccatcaaaccgcag
caaattacctacatcgtcccaggtctttataattttaaccatacagagcttactgatttc
ctccagagggctcaggataacttggatactcaactgcttgagtttgcttggatggagttg
cttgagaagaacaaacctgtgacgccagaagagttagcagagattatttatggtcgctca
gatcctctcgaaagctattgtgctcattttttgctctcaaaagacgagatatacttttct
gtattggagtcgaaaggttctcgatcgatctatagcccccgccgtactgaacaggtggaa
gaacttttacgcaggcaacgtgtgaaggaggcagaagaaagagagtttgaggagtttatt
cagttgctgaagtctgccaagaacgcgcctagtcacactaagccccccaaatcttcatgg
ttagctaatgataaagtgcgagaaaatatcgactcactcaaagcttatgctattgatgcg
tgggcaagcattgaccaacgcaaagtggccggagtgatcttaaaatccatgggattacag
aaaacggctgtctcggcactaaaccttctcatagatattggatattttcctgtacatgtc
aatcttgatctgcttaaactgaatctccccaccgaccactccgatgcagttgttgaagct
gctgaaattcttctttcagagtcttctgatcttgatgcggctaggaggatcgatctcaca
cacttgaaggtatatgcaattgatgttgatgaggctgatgagcttgacgatgccctgagt
gcaacgagattgcaggatggacggataaagatctggatacatgttgctgatcctgctaga
tatgttacacctgggagcaaagtggacagagaggcaaggagaaggggaacttctgtcttt
cttcctaccgctacttatcccatgtttccagaaaaacttgccatggaaggaatgagtttg
agacaaggagaaacatgcaatgctgtctctgtgtctgttgtcctccgttctgatggcagc
attgcagaatattcggtagaaaattcaatcatcagaccgacctatatgttgacatatgaa
agtgctgctgagctgcttcacatgaacctccaagaggaggttgaactgagattgctgtcc
gaagcagctttcctccgctctcaatggcgccatgagcagggtgcagtggacacaactaca
ctggaaactcgtatcaaagtggtgaatcctgaagatccagaaccgttgattaatctctat
gtagagaatcaggcagacccggcaatgagacttgtctttgaaatgatgatactttgtggg
gaggttatagcaacgtttgggtctcagcacaatattccattgccatatagaggacaacca
cagtcaaatattgacgtgtctgcatttgcgcatcttccagaaggacctgttcgttctgca
tccattgtcaaagtaatgcgtgctgcagaaatgaatttcagatgtcctgttcgacatgga
gtgctcggaattccgggttacgttcagttcacatctcccattcgtcgatacatggatctt
accgcacactaccagattaaggcttttcttagaggaggtgacaattttccattctcagct
ggtgagctagaaggtatagcagcgtccgtaaacatgcaaaaccgagtagtgagaaaactc
tgcaacagtggtcttcgttattgggtaatagagtttctaagaagacaacagaagggtaaa
aaatacaccgcattgatcttgagatttgtcaaagaccgtatcgcatctcttttgttggtt
gaggtgggttttcaagcaaccgcatgggtatcagaaggaaaacaagtgggagatgaagtc
gaagttcgagtagaagaagctcatccccgcgacgatcttattcttctcaaagaagttctc
tag
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