KEGG   Brassica napus (rape): 125606336
Entry
125606336         CDS       T04128                                 
Name
(RefSeq) phytochrome B
  KO
K12121  phytochrome B
Organism
bna  Brassica napus (rape)
Pathway
bna04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:bna00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    125606336
SSDB
Motif
Pfam: PHY PAS PAS_2 GAF HisKA HATPase_c PAS_4 PAS_9 PAS_8 PAS_3 sCache_3_2
Other DBs
NCBI-GeneID: 125606336
NCBI-ProteinID: XP_048631329
LinkDB
Position
Unknown
AA seq 1169 aa
MVSGVGGGGGSGGSGRGGGRGGEESSSTHRREQAQSSGTKSLRPQSQPQTESISKAIQQY
TVDARLHAVFEQSGESGRSFDYSQSLKTTTYGSSVPEKQITAYLSRIQRGGYIQPFGCMI
AVDESTFAIIGYSENAREMLGLTPQSVPSLERPEILAMGTDVRSLFTSSSSVLLERAFVA
REITLLNPVWIHSKYTGKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRA
ISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESRREDLEPYIGL
HYPATDIPQASRFLFKQNRVRMIVDCHATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQY
MANMGSIASLAMAVIINGSEEDGSSVAGGRSAMRLWGLVVCHHTSSRCIPFPLRYACEFL
MQAFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAF
LYHGNYYPLGVAPTEAQIKDVVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAV
AYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSQPWET
AEMDAIHSLQLILRDSFKESEAAMNSKTADGAVQPYSMAGEQGIDELGAVAREMVRLIET
ATVPIFAVDAGGCINGWNAKIAELTGLSVEEAMGKSLVSDLIYKENEETVDKLISRALRG
DEDKNVEIKLKTFSSELQGKAVFVVVNACSSKDYSNNIVGVCFVGQDVTGQKIVMDKFIN
IQGDYKAIVHSPNPLIPPIFAADENTCCLEWNTALEKLTGWSRSEVIGKMLVGEVFGSCC
RLKGPDALTKFMIVLHNAIGGQETDKFPFPFFDRNGKFVQALLTANKRVSFDGKVIGAFC
FLQIPSPELQQALAVQRRQDTECFTKAKELAYICQVVKNPLSGLRFTNSLLEATDLNEDQ
KQLLETSVSCEKQISRIVSDMDLERIEDGSFELVRTEFLLGSVINAIVSQAMFLLKERGV
QLIRDIPEEIKSIQVYGDQTRIQQLLAEFLLSIIRYAPSHEWVEIHISHVPKQMADGFYA
IRTEFRMACPGEGLPPELVRDMFHSSRWTSPEGLGLSVCRKILKIMNGEVQYIRESERSY
FLIILELPVPMKRPLSTASGSGDMMLMMP
NT seq 3510 nt   +upstreamnt  +downstreamnt
atggtttccggagtcggcggcggcggaggaagcggcgggagtggccgcggcggcggccgc
ggcggagaagaatcctcatcaactcaccggagagaacaagctcaatcctcaggtacaaaa
tctctcaggccacagagccaaccacaaacggaatcaattagcaaagctattcagcaatac
acagtcgacgctcgactccacgccgtcttcgaacaatccggcgagtcaggaagatccttc
gactactcgcaatccctcaaaacgacgacgtacggctcctcggtcccggagaagcagatc
acggcctacctctccaggatccagcgcggcggctacatccagccgttcggatgcatgatc
gccgtcgacgagtccaccttcgccatcatcggctacagcgagaacgcgcgggaaatgctc
ggcctcactccccagtccgtccccagcctcgagaggcccgagattctcgccatgggaact
gacgtccgctccctcttcacctcctccagctcggtcctcctcgaacgcgccttcgtggcg
cgtgagatcacgctcctgaatcccgtttggatccactccaagtacactgggaagccgttt
tacgctatcttacacaggatcgacgttggagtcgtgatcgatttggagccggcgaggact
gaggatccagcgctttccatcgccggagcggttcagtctcagaagctagccgttcgcgct
atctcgcagttacagtctctccccggtggagatatcaagctgctttgtgatacggttgtg
gagagtgtgagggacttaaccggatacgaccgtgtgatggtgtacaagtttcacgaagac
gagcatggagaggttgttgcggagagtaggagagaggatttggagccttacattggtttg
cattatccagctactgatattccacaagcgtcacggttcttgtttaagcagaatcgagtg
cgtatgattgttgattgccacgcgacgccggttctcgtggtgcaagacgataggctgact
cagtctatgtgcttggttgggtctactttgagagctcctcacggttgtcactctcagtat
atggcgaatatggggtctatcgcgtctttagcgatggcggttataataaacgggagtgaa
gaagatgggagtagtgtcgctggtgggagaagcgctatgaggctttggggtttagtcgtt
tgccatcatacttcttctcgatgcataccgtttccgttgaggtatgcttgcgagtttttg
atgcaggcgtttggtttacagttgaacatggagttgcagttggctttgcagatgtcggag
aaacgcgttttgaggacgcagacgctgttgtgcgatatgcttctgcgtgactcgcctgct
gggattgttacgcagagtcctagtatcatggacttggtgaaatgtgacggtgcagcgttt
ctttaccacgggaattattacccgttgggtgttgctccgacggaagctcagattaaagac
gttgtggagtggttgcttgcgaatcacgctgattcaactggtttaagcactgatagttta
ggggacgcaggttatcccggagcagctgcgttaggggatgctgtgtgcggtatggcggtt
gcgtatatcacaaaaagagatttccttttctggtttcgttctcatacagctaaagagatc
aaatggggaggcgctaagcatcatccagaggacaaagatgatgggcaaaggatgcatcct
cgctcttctttcaaggcttttcttgaagttgttaagagtcggagtcagccgtgggaaact
gcggaaatggatgcgattcattcgctccagctgattctaagggactcttttaaggaatct
gaggcagctatgaactcgaaaactgcagatggcgcggttcagccttatagtatggcagga
gagcaggggattgatgagttaggtgctgttgcaagagagatggttagactcatcgagaca
gcaactgtgcctatattcgctgtggatgctggaggatgcatcaatggatggaacgctaag
attgcagagttgaccggtctctcggttgaagaagctatggggaagtctctggtttctgat
ctgatatacaaagagaatgaagaaactgttgataagctcatttctcgtgcgctcagaggg
gacgaggacaagaatgtggagataaagctgaaaactttcagctctgaactacaggggaaa
gcggtttttgtggttgtgaatgcatgttcgagcaaggactactcaaacaacattgttggc
gtctgttttgtgggacaggatgttactggtcagaaaatcgtaatggacaagttcatcaac
atacaaggagactacaaagccattgtccatagcccaaacccactgattccaccaatcttt
gcggcggacgagaacacgtgctgcctggagtggaacaccgcgttggaaaagctcactggt
tggtctcgcagtgaagtgattgggaaaatgcttgttggggaagtgtttgggagctgttgc
aggctaaagggtcctgatgcattaaccaagttcatgattgtgttgcataatgcgatcggt
ggccaagaaacagacaagttccctttcccgttctttgaccgcaacgggaagtttgttcag
gctctactgactgcaaacaagcgtgtaagcttcgatggaaaggttattggggctttctgt
ttcttgcagatcccgagtcctgagctgcagcaagctttagcagttcaacgaaggcaggac
acagagtgtttcacgaaggcgaaagagctagcttacatttgtcaggtggtaaagaatcct
ttgagcggtttgcgtttcacaaactcgttgttggaagctacagacttgaacgaggatcag
aaacagcttcttgaaacaagtgtttcttgcgagaaacagatttcgaggattgtcagtgac
atggatcttgaaagaattgaagacggttcgtttgagctagttagaacggagtttttactc
ggaagtgtcatcaacgcgattgtaagccaggcgatgttcttattaaaggagagaggtgtt
cagctgatccgtgacattcctgaagagatcaaatctatacaagtttatggagaccagaca
aggattcaacagctcctagctgagtttctgctgagtataatccggtatgcaccgtcccat
gagtgggtggagatccatataagccatgttccgaagcaaatggctgatggattctacgct
attcgcacagaatttagaatggcgtgcccaggtgaaggtctgcctccagagctagtccga
gacatgtttcatagcagcaggtggacgagccctgaagggttaggactaagcgtatgtaga
aagattctaaagatcatgaacggtgaggttcagtacatccgagagtcggaacgttcctat
ttcctcatcatactcgagctcccggtgcctatgaaacgccctttgtcaaccgctagtggc
agcggagacatgatgttgatgatgccatag

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