KEGG   Brassica napus (rape): 125606444
Entry
125606444         CDS       T04128                                 
Name
(RefSeq) FACT complex subunit SSRP1
  KO
K09272  FACT complex subunit SSRP1/POB3
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:bna03000]
    125606444
   03036 Chromosome and associated proteins [BR:bna03036]
    125606444
Transcription factors [BR:bna03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG2-related
    125606444
Chromosome and associated proteins [BR:bna03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    FACT complex
     125606444
SSDB
Motif
Pfam: PH1_SSRP1-like POB3_N SSrecog Rttp106-like_middle HMG_box HMG_box_2 HMG_WDHD1 CDC45 HMG_box_5 YL1
Other DBs
NCBI-GeneID: 125606444
NCBI-ProteinID: XP_048631470
LinkDB
AA seq 646 aa
MTDVHSFNNISLSGRGGSNPGLLKINSGGIQWKKQGGGKAVEVDKSDIVGVSWMKVPRTN
QLGVKTKDGLYYKFIGFRDQDVASLTSFFQSAFGKTPEEKQLSVSGRNWGEVDLNGNNLT
FLVGGKQAFEVSLADVSQTQLQGKNDVLLEFHVDDTAGANEKDSLMEISFHIPNTNTQFV
GDETRPPAQVFHDNILKVADVGAGVEEAVVTFEGIAILTPRGRYNVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPHTFVVISLDPPIRKGQTLYPHIVMQFETDSVVESELSIS
DDLMNTRFKDKLERSYKGLIHEVFTTVLRWLSGAKITKPGKFRSSQDGFAVKSSLKAEDG
VLYPLEKGFFFLPKPPTLILHDEIDYVEFERHAAGGANMHYFDLSIRLKTDHEHLFRNIQ
RNEYHNLYSFISSKGLKIMNLGGAGTAEGVAAVLQDNDDDDAVDPHLERIRNQAADESDE
EDEDFVGAEDDDGGSPTDDSGEDDDSDASDADGGEKEKSVKKEPKKEASSSKGLPLKKKA
LATEEGSSKKKTQKKKKDPNAPKKAMSGFMYFSQMERDNIKKSNPGIGFGDIGKVLGDKW
RQMSAEEKEPYEAKAQVDKKRYKDEISDYKNPQPMLVDSGNDSDSN
NT seq 1941 nt   +upstreamnt  +downstreamnt
atgacggacgttcattccttcaacaacatctccctcagtggccgcggcggatcgaaccct
ggactccttaagatcaactcaggagggattcaatggaagaagcaaggcggcggcaaagct
gtggaggtcgacaaatcggacatcgtgggcgtgagctggatgaaggttccgaggactaac
cagcttggtgtcaaaaccaaagatgggttgtactataagttcattggctttcgtgatcag
gatgttgcgagcctgaccagctttttccaaagtgcgtttgggaaaacgcctgaagagaaa
cagctctctgttagtggtcgcaattggggtgaggtggacttgaatgggaataatttaacc
tttttggttggtgggaagcaagcttttgaagtgtctctggctgatgtgtcacagactcag
cttcaagggaagaatgacgtcttgttggagtttcatgttgatgatactgcgggtgccaat
gagaaagactcgttgatggagataagttttcatattcctaataccaacacccagtttgtt
ggtgatgaaactcgcccacctgctcaagttttccatgacaatatcttgaaagtggctgat
gttggtgctggagttgaggaggctgtcgtcacatttgagggtattgcaatcctcactccc
aggggtcggtacaatgtggagcttcacctttctttcttacgcttgcaaggacaagccaat
gactttaagattcaatacagtagtgttgtccgcttgtttttgcttccaaagtcaaaccag
ccacacacgtttgttgttatatctctagacccaccaatccggaaaggtcagaccctgtac
ccccatattgtgatgcagtttgagacagactccgtggtcgaaagtgaactctcaattagt
gatgatcttatgaatacaaggttcaaggacaagttggagcgatcatataagggtctcata
catgaagtgttcaccaccgtgttgcgttggctgtctggtgcaaagatcactaaaccaggg
aagttccgcagttcccaagatgggtttgcagtgaaatcatctctcaaggcagaagatggt
gttctctatccactcgagaagggctttttcttcttacctaaacctccaacgcttatactt
catgatgagattgactatgtggagtttgaaaggcatgctgctggtggtgctaacatgcat
tacttcgatctctccataagactgaaaactgatcatgaacatctcttccggaatattcag
aggaacgagtatcacaatctctattccttcataagctctaagggattgaagatcatgaac
cttggaggtgcgggtaccgcagagggtgtagctgctgttctccaggataatgatgatgac
gatgctgttgaccctcatcttgagcgtatcagaaaccaagctgctgatgagagtgatgag
gaggacgaagactttgttggggctgaggatgacgacggtggctcaccgactgatgattct
ggcgaggacgacgactctgatgctagtgacgctgacggaggcgagaaagagaaatctgtt
aagaaggagcccaagaaagaggcttcgtcttcgaaaggattgcccttaaagaagaaagcg
ttggcgacagaagaaggaagtagtaagaagaagacgcagaagaagaagaaggatcccaat
gcacctaagaaggcaatgtctggtttcatgtacttctcccaaatggaaagagacaacata
aagaagagtaacccaggaataggatttggagatataggaaaggtgcttggagataagtgg
cgtcagatgtctgctgaggaaaaagagccgtatgaagctaaggcgcaagttgacaagaag
cgatacaaggatgagattagtgattacaagaaccctcagcccatgcttgtagactctgga
aacgattccgacagtaactaa

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