Brassica napus (rape): 125606889
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Entry
125606889 CDS
T04128
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha, chloroplastic-like isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bna
Brassica napus (rape)
Pathway
bna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125606889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
125606889
03110 Chaperones and folding catalysts [BR:
bna03110
]
125606889
03029 Mitochondrial biogenesis [BR:
bna03029
]
125606889
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
125606889
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
125606889
Messenger RNA biogenesis [BR:
bna03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
125606889
Chaperones and folding catalysts [BR:
bna03110
]
Heat shock proteins
HSP60 / Chaperonin
125606889
Mitochondrial biogenesis [BR:
bna03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
125606889
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125606889
Exosomal proteins of other body fluids (saliva and urine)
125606889
Exosomal proteins of breast cancer cells
125606889
Exosomal proteins of colorectal cancer cells
125606889
Exosomal proteins of bladder cancer cells
125606889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Ribosomal_L29
EGF_Tenascin
Motif
Other DBs
NCBI-GeneID:
125606889
NCBI-ProteinID:
XP_048631860
LinkDB
All DBs
Position
A3:complement(11870417..11873089)
Genome browser
AA seq
586 aa
AA seq
DB search
MASSNALSSASLLCSSRQVCVQGKLSGGNQQKGQRVSYRRRFSVRANVKEISFDQSSRAA
LQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDAMENAGAALIRE
VASKTNDSAGDGTTTASVLAREIIKHGLLSVTSGANPVSLKRGIDKTVQALIKELEKKAR
PVKGGSDIKAVATISAGNDELVGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEID
RGYISPQFVTNPEKLLVEFENARVLITDQKITAIKDIIPILEKTTQLRAPLLIIAEDVTG
EALATLVVNKLRGVLNVVAVKAPGFGERRKAMLQDIAILTGAEYQALDMGLLVENTTIDQ
LGIARKVTISKDSTTLIADAASKDELQARISQLKKELFETDSVYDSEKLAERIAKLSGGV
AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGATLVHLSTVIPAIKEKLEDA
DERLGADIVQKALVAPAALIAQNAGIEGEVVVEKIMFSEWEIGYNAMTDTYENLLEAGVI
DPAKVTRCALQNAASVAGMVLTTQAIVVDKPKPKAPAAAPPQGLMV
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccagtaacgctctctcttccgcctccctcctctgctcctctcgacaggtgtgt
gttcagggaaagctgagtggtggaaatcagcagaaaggtcaaagagtaagctacaggaga
cgtttcagtgtcagagcaaatgtaaaggaaatctctttcgaccagagctcaagagctgct
cttcaagctggcatcgacaagcttgctgatgctgttggtctcactcttggccctagaggg
agaaatgttgtgttggatgaatttggaagccccaaggttgtgaatgacggagtcaccatt
gccagggctattgagttacctgatgccatggagaatgcaggtgcagcgcttatccgtgag
gttgctagtaagactaatgactcagctggtgatgggacaacaactgcatctgtccttgct
agggaaataatcaaacacggattattgagtgtcacttctggtgccaatcctgtgtccctc
aagaggggaatcgataagactgttcaagctttgatcaaagagcttgagaagaaagctaga
cctgtcaaaggtggtagtgacatcaaagccgtggctacaatctcagctggaaatgatgag
cttgtgggaacaatgattgctgatgccattgacaaagttggacctgatggtgttttgtcc
attgaatcttcttcctcttttgagaccaccgtcgaagttgaagaaggaatggagattgac
agaggttacatctcacctcagtttgttacaaaccctgagaaactactagttgagtttgag
aatgcaagggtgttgatcactgatcagaagatcactgcaatcaaagacatcatccccatc
ttggagaagaccactcagcttcgagctccattgctgattattgcagaggatgttacaggt
gaggccttagcaacccttgtcgtgaacaaactccgtggtgtcctcaatgttgtcgccgtg
aaggctcctggatttggagaaagaagaaaggctatgcttcaggatatcgctatcttgaca
ggagctgagtaccaagcccttgacatgggcttgctggtcgagaacacaacaatagatcag
ttgggtattgctcgtaaagtcaccataagcaaagattcgactacgcttatcgcagatgca
gcttccaaggacgagttacaagctcgtatctctcagctcaagaaagaactattcgagact
gattctgtctacgactcagagaagctcgctgagagaatagctaaactctccggtggtgtt
gcggtcattaaagtgggagcagcgactgaaactgagcttgaggaccgtaagcttcgtatt
gaggacgcaaagaacgctacatttgctgctatcgaagaaggtatagttcctggtggtggt
gccactttggtgcatctctccactgtgattcctgccattaaagagaagctggaggatgct
gatgaacgtttgggagctgacatagtacagaaggctttggtggcaccagctgcgcttatt
gcgcagaacgctggaatcgaaggagaagtggtagtggaaaagattatgttcagtgaatgg
gagatagggtacaacgccatgactgatacctatgagaatctgttggaagctggagtgatt
gatccagctaaagtcacgagatgtgcgcttcagaacgctgcatcggttgcagggatggta
ctgaccactcaggccattgttgttgacaaacccaaacctaaggctcctgctgctgctcct
cctcagggtctcatggtctaa
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