Brassica napus (rape): 125606942 Help Entry 125606942         CDS       T04128                                  Name (RefSeq) DNA mismatch repair protein MSH6   KO K08737   DNA mismatch repair protein MSH6 Organism bna  Brassica napus (rape) Pathway bna03430   Mismatch repair Brite KEGG Orthology (KO) [BR:bna00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     125606942  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:bna03400]     125606942 DNA repair and recombination proteins [BR:bna03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      125606942 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I MutS_IV MutS_II PTM_DIR17_Tudor nSTAND_NTPase5 LBR_tudor Motif Other DBs NCBI-GeneID:  125606942 NCBI-ProteinID:  XP_048632075 LinkDB All DBs Position A3:complement(14365472..14372814) Genome browser AA seq 1337 aa AA seqDB search MAPSRRQISGRSPLVNPQRQITSFFGKSASSPSPSPSPLSNHKTPKSNPNPNSPSPSPLS NTKIPKSNSNPSSPPLSNNKLPKSNPPARSPSPGPTTPSPVHPKLKKPLLVIGQTPSPPK FTETTYGDEVVGKQVRIYWPLDKKWYDGSVTSYNKGEGKHVVEYEDGEEESLDLGKEKIE WVVEGDSVNRFKRLRRGASAFRRVVTDEDEDVEMGHVEEEKEDKSDGDDSSDEDWGKNVG KEVCESEEDDVELDAEDDTMDEEEIVEEKDEETPSKTDSRKRKKTSEVAKPGGEKKIKTD KVTTFKGFKASVVEPVKKIGEADKVVKSLDDNMLDGDALARFGARESEKFRFMGIDRRDA KRRRPTDENYDPRTLYLPPDFVKRLTGGQRQWWEFKSKHMDKVLFFKMGKFYELYEMDAH VGAKELDLRYMKGEQPHCGFPEKNFSVNIEKLVQKGYRVLVVEQTETPDQLERRRKEKGS KDKVVKREICAVVTRGTLTDGEMVLTNPDASYLMALTEGGESLTDEKAEHNFGVCLVDVA TKKIILGQFKDDQDCSALSCVLSEIRPVEVIKPANALSSATERTIVRHTRNPLVNNLVPL SEFWDAEKTIHEIGILYKGFSCQPSSAYSGEGKVLGDPPLNNESGSSCLPKMLSELSNGD KDGSLALSALGGAIYYLRQAFLDESLLRFAKFESLPYCDFSNFTVKQHMVLDAAALENLE IFENSRNGGVSGTLYAQLNQCITASGKRLLKTWLARPLYNPELIKERQDAVAILRGENLP YSLEFRKALSRLPDMERLIARIFSSIEASGRNGDKVVLYEDVAKKQLQEFISTLRGCETM VEACSSLRASLEHDNSRRLRHLLTPGQSLPNISPFIKYFKDAFDWVEAHDSGRVVPHEGA DEEYDFTCKTVKELEVSLTKHLKEQRKLLGDASIKYVTVGKDEYLLEVPESLSGSIPQDY ELCSSKKGVFRYWTPTIKKLLKELAQAKSEKESALKSISQRLIGRFCEHQEEWRQLVSAT AELDVLISLAFASDSYEGVRCRPVISSSKSVDVPHLSATGLGHPVLRGDSLGRGSFVPND VKIGGSKQASFILLTGPNMGGKSTLLRQVCLAVILAQIGADVPAETFELSPVDRIFVRMG AKDHIMAGQSTFLTELSETAVMLSSATRNSLVVLDELGRGTATSDGQAIAESVLEHFIDK VQCRGMFSTHYHRLSMDYQTNPQVSLCHMGCQVGEGSGGVEEVTFLYRLTPGACPKSYGV NVARLAGLPDDVLQRAVIKSQEFEGLYGKNHKKADRKMAEMIKQIISGVASDSDTATSKH LLSELHYKANTYLRLTN NT seq 4014 nt NT seq  +upstreamnt  +downstreamnt atggcgccgtctcgccgtcagatcagcggaaggtctccgttggtcaatcctcagcgtcaa atcacctccttcttcggcaaatccgcttcatctccttctccctctccatctccactctcc aatcacaaaacccccaaatctaaccctaaccctaattctccgtctccatcgcctctctcc aataccaaaatccccaaatctaactctaaccctagctctccgcctctctccaataacaaa ctccctaaatcgaatcctcctgctcgtagtccaagccccggtccgacgactccttctcct gtacaccccaagctcaagaagccactcctcgtcatcggacagacaccttcgcctccgaaa tttacggaaactacgtatggagacgaggtggtggggaagcaagttaggatttattggccg ttggataagaaatggtacgatggaagcgtgacatcgtacaataagggtgaaggtaagcat gtggttgagtatgaagatggggaagaggagtctttggatttagggaaggagaagatcgaa tgggtggttgagggggactcagtaaataggtttaagcgattgagaagaggagcttcggct ttcagaagagttgtgacggatgaagatgaggatgtggagatgggtcatgtggaagaagag aaagaagataaaagtgatggtgatgattctagtgatgaggactggggaaagaacgtgggg aaggaggtgtgtgagagcgaagaagatgatgtggagttggatgctgaggatgatacgatg gatgaagaagagatagtggaggagaaagatgaagaaactccttccaaaactgactctaga aagcggaagaagactagtgaagtagcgaaaccaggtggtgagaagaaaatcaagactgat aaagttactaccttcaaaggttttaaggcttctgtggtggaacctgtgaagaagattgga gaagctgataaggttgtcaagagtttggatgataacatgttggatggggatgctctggct agattcggtgcgcgtgaatctgagaaatttcgcttcatgggaatagaccgcagagatgca aaaaggagacgacctaccgatgagaattatgatccgaggacactctaccttcctcctgat tttgtcaagagattaacaggaggccagagacaatggtgggagtttaaatcaaaacatatg gacaaagttcttttcttcaagatgggtaaattctatgagctttatgagatggatgcgcac gtaggagccaaggaacttgatttacggtacatgaagggagaacaacctcattgtggattt cctgagaagaacttctctgtaaacatcgagaaattagttcaaaagggctaccgggtttta gtggtggagcaaacagaaacacctgatcagctggagcgacgccgaaaagagaaaggctcc aaggataaagttgtgaagcgtgaaatatgtgcagttgttacaagaggcacgctgacagat ggggagatggtattaactaatccagatgcatcttatcttatggcgttgactgaaggagga gagagtttaactgacgagaaagcagagcacaattttggtgtatgtttggttgatgttgca acaaagaagatcatccttgggcagttcaaggatgatcaagattgcagtgcattgtcttgc gtgctctctgagataaggccggtggaagttattaaaccagctaatgcgctgagttctgca acagagagaacaatagttagacacaccagaaatcccttggtaaataatctggttccactt tctgaattctgggatgcagagaagaccatacatgaaattgggattctctacaagggattc agttgtcaaccgtcttctgcttattccggtgagggaaaagttctaggagatccacccctt aacaatgaaagtggttcaagctgcctaccaaaaatgttgtctgaattatcaaatggagat aaggacggtagcctggcactctctgctcttggtggtgccatttactacctgagacaagct ttcttggatgagagtctacttagatttgccaagtttgaatccctgccttactgtgatttc agcaactttactgtgaaacagcacatggttcttgatgctgctgctcttgaaaaccttgag atatttgaaaacagcagaaatggaggcgtttcgggaacgctgtatgcacaattgaaccaa tgtatcactgcgtctgggaaacggttgctgaaaacatggctggcaagacctttatataat ccagaactgatcaaggaacgtcaagatgctgtagcaattcttcggggggaaaatctccct tactcgctggaattccggaaggcgctgtcaagacttccagacatggagcggttgattgca cgtatcttttctagcattgaagctagtggaagaaatggagacaaagtggttctatatgag gatgtagcaaagaagcagctacaagagttcatatcaactctacgtggttgtgaaacaatg gtagaagcatgctcttcccttcgtgctagtttggagcatgataattccagacgcctgcgt catttacttactcctggtcaaagtcttccaaacatctcacccttcattaagtattttaag gatgcttttgactgggtagaagctcacgattctggacgtgtagtacctcatgaaggagct gatgaagaatacgattttacctgcaaaacggtaaaagaattggaagtcagtttgacgaaa catctgaaggagcaacgaaaattactcggagatgcatcgataaagtatgttactgttggg aaagacgaatatctcttggaagttcctgaaagtttaagtgggagtattcctcaggattac gaattatgctcatccaaaaagggtgtctttcgatattggactcctaccatcaagaaatta ttaaaagagctagcacaagcaaaatctgaaaaagagtctgctctaaaaagcatttcacaa agattgattggacgtttctgcgagcatcaagaagaatggagacaattggtttctgcaaca gctgagctagacgtgttgatcagcctcgcttttgcaagtgattcttacgaaggagtaaga tgccgtccagtaatatcaagttctaaatctgttgatgttccgcacttgtcagccactggt ctagggcatccagttctgaggggtgattcattaggcagaggctcttttgtaccaaatgat gtaaagattggtgggtctaagcaggccagcttcatcctcctcacaggccctaatatgggt ggaaaatcaacccttcttcgccaagtttgcttggctgtgatcttggctcagattggagca gatgtcccagcagaaacctttgagctttcgcctgttgacagaatatttgtccggatgggt gcaaaagatcatattatggcaggacaaagcacgtttttaacagaactatcagaaactgct gtaatgctgtcatcagcaactcgaaactcgctggtggtgctagatgagcttggacgagga acagccacatcagatggacaagccattgcggaatccgttcttgagcacttcatagacaaa gtgcagtgtagaggaatgttctctactcattatcatcgtctctctatggattatcaaacc aatccacaggtatcgctttgccatatgggatgtcaagtgggagaaggaagtggtggagtg gaagaagttacatttctctacagattgacgcctggtgcatgtcctaaaagctatggagtt aacgttgctcgcttagctggtcttccagatgatgtacttcagagagccgtgattaaatcc caagagttcgaaggcttgtatggtaaaaaccataaaaaggctgatcgtaaaatggcagaa atgataaagcagatcatcagtggtgttgcatcagattctgatactgcaacttcaaagcac ttgctgtctgagctacactacaaggctaacacttatctccggctaaccaattga

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