Brassica napus (rape): 125607123
Help
Entry
125607123 CDS
T04128
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit E-like
KO
K07466
replication factor A1
Organism
bna
Brassica napus (rape)
Pathway
bna03030
DNA replication
bna03420
Nucleotide excision repair
bna03430
Mismatch repair
bna03440
Homologous recombination
bna03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125607123
03420 Nucleotide excision repair
125607123
03430 Mismatch repair
125607123
03440 Homologous recombination
125607123
03460 Fanconi anemia pathway
125607123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bna03000
]
125607123
03032 DNA replication proteins [BR:
bna03032
]
125607123
03400 DNA repair and recombination proteins [BR:
bna03400
]
125607123
Transcription factors [BR:
bna03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
125607123
DNA replication proteins [BR:
bna03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
125607123
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
125607123
MMR (mismatch excision repair)
125607123
DSBR (double strand breaks repair)
HR (homologous recombination)
125607123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
125607123
NCBI-ProteinID:
XP_048632839
LinkDB
All DBs
Position
A3:complement(24251364..24254316)
Genome browser
AA seq
812 aa
AA seq
DB search
MGEILTAGVIEMIRNDTVKNHEHMKPVLQVTELKLFTAQQEPSKERIRVLLSDGTAFIQG
MLGITLNPLVKDGVLQVGSILRLDHFVCSEIQKKKIVVIAQLEVITTKSDIIGDHARGRK
ANEQQGGDAGNSSYEQHGRSDVSSARQINSTETGTSLVGQQRQQVFGSGSSFEQHGRSDL
SGGRQINNNGTGTSHAGIGQQRQQVYGSGSGSSLPGSAPPSARSYNNPSAGLVRDPPPTY
PLQRHQPPPSMYQNRGPVARNEAPPRITPINALNPYSGRWTIKARVTSKGDLRTYNNQRG
GGKVFNFDLLDRDGGEIRVTCFNAVADQFFDQVVVGNLYLISRGNLRPAQKKYNHLPNDY
EISLDEVSTIQQCHEEDAAIPQNQYNFRSIGDIESMETNSIIDVIGVVSSISPTGTIMKK
TGTETQKRSLQLKDMSGRSVEVTMWGSFCNAEGQKLQSLCDSGEFPVLAVKAGRVSEFNG
KAVSTIGSSQLFVEPDLAEAQKLKEWFAREGRSAPCISISREFTGGGRVDVRKTISQIKD
EKLGTSEKPDWITVNATIIYMKVDNFYYTACPLMNGDRQCNKKVTDNGDGTWRCEKCDKC
VDECDYRYILQLQLQDHTGLTWVTAFQEAGEEIMGMPAKDLYYVKHEHNDEEKFEDIIRK
VAFTKYIFKLKVKEETYGDEPTVKATVVKVDKVNYSSDTRTILDAMEKLRTAEAGSSGVG
TSGTRDVSSVERREFGLPANQSDQYGNQSSNGARPHGGGGAMSCDVCGNTGHVSANCPNT
RSGPQGQYMGGGSYGGSGSYGGGLPRQHVGSY
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgggggagattctgacggcaggggtaatcgagatgataagaaacgatacagtgaagaac
catgaacacatgaaaccggttcttcaagtgacggaattgaagctgttcacggctcagcaa
gaaccgtccaaggagcggattagagtcttgttatcagacgggacggcctttattcaaggg
atgcttgggattactctcaaccctcttgttaaagatggggttcttcaagttggttctatc
cttaggctcgatcatttcgtctgtagtgagatccagaagaaaaagattgttgttattgcg
caattggaagtgattacaactaagtctgatattattggagatcatgcgcgagggcgaaag
gctaatgaacagcaaggaggagacgctggtaacagtagttatgagcaacacggtaggagt
gatgtgagtagtgctcgtcaaatcaacagcactgagacagggacaagtcttgttggtcaa
cagagacaacaagtgtttggttctggctctagttttgagcaacatggtaggagtgatttg
tctggtggtcgtcaaatcaacaacaacgggacagggacgagtcatgcaggtattggccaa
cagagacaacaagtgtatggttctggttctggttctagtttacctggatcagcaccacct
tctgctcggtcctacaacaatccatctgcaggtcttgtgcgtgaccctccacccacttat
cccctccagcgccaccagccaccaccatcgatgtatcagaacaggggaccagtggcgagg
aacgaggcacctcctaggatcactcccatcaatgctctcaacccttactcaggcaggtgg
accatcaaggccagggtcacgagtaaaggagatctcaggacttacaacaatcagcgcggc
ggtgggaaagtgttcaacttcgaccttctagaccgagatggtggagagatacgagtcact
tgcttcaacgcagtggctgatcagttctttgaccaggtcgtcgttggcaatctctaccta
atctcaagggggaacctgcgtcctgctcagaagaagtataatcacctccctaacgactac
gaaatctcgctagacgaagtgtcaacgatacagcaatgccacgaggaggacgctgccatt
cctcagaatcagtacaacttccgttccattggcgatatcgaaagcatggagactaacagc
atcatagatgtgattggcgttgtctcgtccataagccccactggaacaataatgaagaaa
acgggtactgagacgcagaagagatctcttcagctcaaggacatgtctggtcggagcgtt
gaggtgaccatgtggggtagcttctgcaacgcagagggacagaagctgcagagtctctgc
gactctggtgagtttcctgttcttgcagttaaggcggggagggtcagcgagtttaacggg
aaggcagtgagcaccattggttcaagccagctcttcgttgagccagacctcgctgaagct
cagaagcttaaggaatggtttgctagagaaggaaggagcgctccttgcatctccatttcg
agagagttcaccggtggcggcagagtagatgttcgcaaaaccatctctcaaatcaaggac
gagaagctagggacctcggagaagcctgactggatcacagtcaacgccactattatatac
atgaaggtggacaacttctactacacggcttgtcctctcatgaacggtgatcgtcagtgc
aacaaaaaggtgactgacaacggagacgggacgtggcggtgcgagaagtgtgataagtgc
gtggatgagtgtgactacaggtatatactgcagctccagttacaggaccatacaggtctt
acttgggtcacagcgtttcaagaggctggtgaggagataatgggaatgcctgctaaagat
ttgtattatgtgaagcatgagcacaatgatgaggagaagtttgaagatatcatccgcaag
gttgcttttaccaagtacatcttcaagctgaaggttaaagaagagacgtatggggatgag
cctactgtgaaagcaacggttgtgaaagtggacaaggtaaactactcatcagataccagg
actattctagatgctatggagaaactcaggaccgctgaggctggcagctctggtgttgga
acctcaggaacaagagatgtctcgtcagtggaaagaagggagtttggtttacctgcaaac
caatcagatcaatatgggaatcagtctagcaatggcgctaggcctcatggtggtggtggt
gctatgagctgcgatgtctgtggaaacactggtcatgtttctgcaaactgtccaaacact
aggagtgggcctcaagggcagtacatgggtggaggatcttatggaggctcggggagttat
ggaggaggactaccaaggcaacatgttggaagctactga
DBGET
integrated database retrieval system
