KEGG   Brassica napus (rape): 125609009
Entry
125609009         CDS       T04128                                 
Name
(RefSeq) chromatin structure-remodeling complex protein BSH
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
bna  Brassica napus (rape)
Pathway
bna03082  ATP-dependent chromatin remodeling
bna03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    125609009
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    125609009
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:bna01009]
    125609009
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bna03021]
    125609009
   03036 Chromosome and associated proteins [BR:bna03036]
    125609009
Protein phosphatases and associated proteins [BR:bna01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     125609009
Transcription machinery [BR:bna03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     125609009
    SWI/SNF complex
     125609009
Chromosome and associated proteins [BR:bna03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    125609009
   PBAF complex
    125609009
   SWI/SNF complex
    125609009
SSDB
Motif
Pfam: SNF5
Other DBs
NCBI-GeneID: 125609009
NCBI-ProteinID: XP_048635660
LinkDB
Position
A5:22472219..22474612
AA seq 236 aa
MKASGKGPVKFRMPTAENLVPIRLDIQFEGQRYKDAFTWNPSDPDNEIVVFARRTVKDLK
LPPAFFSQISQSIQSQLADFRAYEGQDMYTGEKIIPIKLDLRVNHTLIKDQFLWDLNNFE
SDPEEFARTLCKDLGVEDPEVGPAVAFAIREQLYEIAVQSVSSARESRLSKKSRRGSDYG
SASKASGLSMDLVKLFSFKSSVVRKRKDLDVYEPMVDLLTNEEVDALEAREERHAR
NT seq 711 nt   +upstreamnt  +downstreamnt
atgaaggcttcagggaaaggtcccgtcaagttcaggatgcctactgctgagaacttggta
cctattcgtttagacattcaattcgagggtcagcgttacaaagatgccttcacttggaac
ccttcagacccggataatgagatcgttgtcttcgctagaaggactgttaaagacttgaaa
ctcccacctgcgttcttctctcagatttctcaatctattcagtctcagctcgcagacttt
cgggcatatgaaggacaagatatgtacactggtgaaaagatcataccaatcaagcttgat
ctcagagttaatcacaccctcatcaaggatcagttcttgtgggacctgaacaatttcgag
agtgatcctgaggaatttgcaaggaccttgtgcaaggatttaggtgttgaagatcctgaa
gttggacctgctgttgcatttgcaatcagagaacaactttacgagattgcagttcaaagt
gtgagttcagctagggagagtagattaagcaagaaaagccgcagaggatctgattatggt
tctgcgagcaaggcaagtggcttgtcaatggacctagtgaagttattcagctttaagtcc
agtgtagttcggaaaaggaaagacttggatgtttatgaaccaatggtggatctgctaaca
aatgaggaagttgatgctcttgaagccagagaagagaggcatgcaaggtga

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