Brassica napus (rape): 125609013
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Entry
125609013 CDS
T04128
Name
(RefSeq) novel plant SNARE 13-like
KO
K08494
novel plant SNARE
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
125609013
Membrane trafficking [BR:
bna04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
125609013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
VBS_C3G9
MCPsignal
TMPIT
RHA1_ro05818_N
PhaP_Bmeg
ABC2_membrane_3
COG4_N
Occludin_ELL
CCDC-167
DUF7623
YkyA
Vps53_N
Motif
Other DBs
NCBI-GeneID:
125609013
NCBI-ProteinID:
XP_048635663
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All DBs
Position
A5:22537220..22539891
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AA seq
271 aa
AA seq
DB search
MASNIPMSPQLEQIHGEIRDHFRALANGFQRLDKMKDSTRQSKQLEELTEKMRDCKRLVK
DFDRELKDEEATNPPELNKQLNDEKQSMIKELNSYVALRKTYMSTLGNKKIELFDMGAGP
SAEPTAEDNVQVASAMSNQELVDAGVKRMDETDQAIQRSKQVVEQTLEVGTQTAANLKGQ
TDQMGRVVNHLDTIQFSIKKASQLVKEIGRQVATDKCIMMFLFLIVCGVIAIIVVKIVNP
NNKDIRDIPGLAPPAQSRKLLYLRNPEYMGR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggcttctaatataccgatgagccctcaattggagcagatccatggcgaaatccgtgac
cacttccgagccctcgcgaatggtttccagaggttggataagatgaaggattctactcga
caaagcaagcaactcgaggaactcactgagaagatgcgagactgtaaaaggttggtcaag
gattttgaccgtgaactcaaggatgaggaagctactaatcctcctgaattaaataagcaa
ttgaatgatgagaaacagtctatgattaaggaactcaattcttatgttgctctaagaaaa
acgtatatgagtacccttggcaacaagaagattgaactttttgatatgggagctggaccc
agcgccgaacctacagctgaggacaatgttcaagtcgcttcagcaatgtcaaatcaggag
cttgttgatgctggagtgaaaagaatggatgagactgatcaggccattcagcgctcaaaa
caggttgtagaacaaacacttgaagttggaactcaaactgcagctaatttaaagggacag
acggatcaaatgggacgcgttgtgaaccacttagacacgattcagttctctatcaagaaa
gcatcacagcttgtgaaagagatagggagacaggtggctacggataaatgcataatgatg
ttcctgtttctcattgtatgcggtgtgatagccattatcgtagtgaagatcgtcaacccg
aataacaaggacattagggacatcccaggattagctcctccagcgcaatcgaggaaacta
ctatacttgaggaatccggagtacatgggaagatag
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