Brassica napus (rape): 125609322
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Entry
125609322 CDS
T04128
Name
(RefSeq) novel plant SNARE 11-like isoform X1
KO
K08494
novel plant SNARE
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
125609322
Membrane trafficking [BR:
bna04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
125609322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
NPV_P10
MCPsignal
Med11
DUF948
Laminin_II
Occludin_ELL
Syntaxin_2
JAKMIP_CC3
Endotoxin_N
DUF6659
LRS4
Vps53_N
TMPIT
JHD
DUF3450
Zw10_N
Syntaxin-6_N
Motif
Other DBs
NCBI-GeneID:
125609322
NCBI-ProteinID:
XP_048636586
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Position
A5:complement(5209875..5212296)
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AA seq
263 aa
AA seq
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MDSISAVSEELAEIEGQINDLFRALSNGFQKLEKIKDANRQSRQLEELTDKMRDCKSLIK
DFDREVKSLEGGNDANTNRMLNDRRQSMVKELNSYVALKKKYSSNLASNNKRVDLFDGPA
EDNMEENVLLASNMSNQELMNKGNTMMDDTDQAIERGKKIVQETINVGTDTSAALKAQTD
QMSRVVNELDSIHFSLKKASKLVKEIGRQVATDKCIMAFLCLIVIGVIAIIIVKIVNPNN
KDIRDIPGLAPPAMNRRLLWNHY
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggattcaatatcggcggttagcgaagagcttgctgagatcgaaggacagatcaatgac
cttttccgtgctttatcgaatggattccagaagctggagaagatcaaagatgctaatagg
cagagtaggcagctggaagaactcactgacaaaatgcgtgactgcaagagccttattaaa
gatttcgatagggaagtcaaaagcttggaaggtggaaacgatgccaacactaaccggatg
ttgaacgacagacgtcaatctatggttaaggaactaaactcatatgttgctcttaagaag
aaatattcatccaatttagctagcaataataagcgagttgatctttttgatggacccgct
gaagacaacatggaagagaatgtcttattagcttccaacatgtccaatcaagaacttatg
aataaaggaaacaccatgatggatgacactgatcaagccattgagagaggcaaaaagatt
gttcaggagactataaatgtgggaacagatacttctgcagctctcaaggctcagaccgac
caaatgagtagagtggttaacgaactcgattctattcatttctcactcaagaaagcctcc
aagctggtcaaagaaattggtaggcaggttgccacggacaaatgtataatggcatttctt
tgccttattgtcattggtgtcatagcaatcatcatcgtcaagattgtgaacccaaacaac
aaagacatccgtgacataccgggcctagcaccaccagccatgaacagacgtctactctgg
aaccattactga
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