Brassica napus (rape): 125609462
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Entry
125609462 CDS
T04128
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
125609462
04121 Ubiquitin system [BR:
bna04121
]
125609462
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125609462
Membrane trafficking [BR:
bna04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
125609462
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125609462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_5
Zf_IFT144_1st
zf-HC5HC2H
RPA43_OB
zf-HC5HC2H_2
VPS18_RING_C
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
125609462
NCBI-ProteinID:
XP_048636879
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All DBs
Position
A5:8709222..8710788
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AA seq
335 aa
AA seq
DB search
MEEATNATSYWCHMCSQTVNAVMMEDEIKCPFCRSGFVEEMDEDRRATTTSIWAPILMEM
MNNSATRNQSAESVENETGNGRDLDSQLQEILRRRGRRSSVSVVQLLRGVRALQPESSSN
RDDDDNNHPSNERLIVISPHHQIIAVPRSLVTDSMPDGSSLSDYFIGPGFEALLQRLAEN
DPNRYGTPPARKEDVESLATVKIQEPSLQCSVCLDDFEVGVEAKQMPCKHNFHADCLLPW
LELHSSCPVCRYQLPTDETKTTADSATNDNNGVNESSSASSSSSSQGTENSDANRHEGEG
EEEENDDGNRNAFSIPWPFSSLFSSSSSQDRNSSD
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagctactaatgcgacgagttattggtgccacatgtgttcccaaactgtgaat
gcggtgatgatggaagacgagatcaagtgccccttttgtcgaagcggctttgttgaagag
atggatgaggatcggagagcaacaaccacttctatctgggctcccatcttgatggaaatg
atgaacaactctgccacaaggaaccagagtgctgagtctgttgagaatgaaaccggaaac
ggtagagacttggattcgcagcttcaagagattcttaggagaaggggaagacgttcttcc
gtttccgttgtgcaattgcttcgtggagtaagagcactccaacctgagagtagtagtaac
agagatgatgatgacaacaaccatccgtcaaatgaacgcttgatcgtcatcagtcctcat
catcagattatcgccgtcccacgctctctcgttacggattctatgcctgatggttcttct
ctaagcgactatttcatcggtcctggattcgaagcgctgctccagcgtttagcggagaat
gatcccaacagatacggaacacctccagctcgtaaagaagatgtcgagtctttggccact
gtcaaaatccaagagcctagtctgcagtgttctgtgtgtttggatgattttgaggttggg
gtcgaggctaaacagatgccctgcaagcacaacttccatgctgactgcttgctcccgtgg
cttgagcttcacagttcatgccctgtttgtcggtatcagttacctacagatgagaccaag
actactgctgactcagcaacaaatgacaacaatggagttaatgagtcttcttctgcctca
agcagcagcagcagccagggaactgagaacagcgatgcaaaccgtcacgaaggagaagga
gaagaggaggagaacgatgatggtaataggaacgcattctcgattccatggccgtttagc
agcttgttctcgtcgtcctcgtctcaagacagaaattcatccgattga
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