Brassica napus (rape): 125609464
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Entry
125609464 CDS
T04128
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bna
Brassica napus (rape)
Pathway
bna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125609464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
125609464
03110 Chaperones and folding catalysts [BR:
bna03110
]
125609464
03029 Mitochondrial biogenesis [BR:
bna03029
]
125609464
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
125609464
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
125609464
Messenger RNA biogenesis [BR:
bna03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
125609464
Chaperones and folding catalysts [BR:
bna03110
]
Heat shock proteins
HSP60 / Chaperonin
125609464
Mitochondrial biogenesis [BR:
bna03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
125609464
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125609464
Exosomal proteins of other body fluids (saliva and urine)
125609464
Exosomal proteins of breast cancer cells
125609464
Exosomal proteins of colorectal cancer cells
125609464
Exosomal proteins of bladder cancer cells
125609464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-GeneID:
125609464
NCBI-ProteinID:
XP_048636883
LinkDB
All DBs
Position
A5:8723028..8726583
Genome browser
AA seq
600 aa
AA seq
DB search
MASTFTATSSIGSMVAPNGHKSDKKLMNKLSSSSFGRRQNVCPRLRRSSPAIVCAAKELH
FNKDGTTIRRLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDP
VENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAK
ALVAELKKMSKEVEDSELADVAAVSAGNNEEIGSMIAEAMSRVGRKGVVTLEEGKSAENA
LYVVEGMQFDRGYISPYFVTDSEKMSVEFDNCKLLLVDKKITNARDLVGVLEDAIRGGYP
ILIIAEDIEQEALATLVVNKLRGTLKIAALRAPGFGERKSQYLDDIAILTGATVIREEVG
LSLDKAGKEVLGHAAKVVLTKETSTIVGDGSTQEAVQKRVTQIKNLIEQAEQDYEKEKLN
ERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKV
DAIKATLENDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSNENVKYGYNAATG
KYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPAGNPMDNSGYGY
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaactttcacagcaacgtcttccattggttcaatggttgctccaaatggtcac
aaatctgataagaaacttatgaacaagttgtcttcaagctcattcggaaggaggcagaac
gtgtgccccaggctcagaagatccagtcctgcaattgtatgcgcagccaaggagttgcat
ttcaacaaagacgggactaccattaggagacttcaagctggtgtcaacaagcttgcagac
ctagttggtgttacacttggacctaaagggcgaaatgttgttcttgagagcaagtatgga
tctccaagaattgttaatgatggtgtcactgttgctagggaggttgaactggaagaccct
gttgagaacattggtgcaaagcttgtcaggcaagcagctgccaagaccaatgacttggcc
ggtgatggtaccaccacatctgtggttcttgcacaaggttttattgctgagggtgtcaag
gtggttgctgctggtgcaaaccctgtattgatcactagaggcattgagaagacagccaag
gctttggttgccgagctcaagaaaatgtctaaggaggttgaagacagtgaacttgcagat
gtggcagctgttagtgcgggtaacaacgaagagattggaagtatgattgccgaagcaatg
agcagagttggcaggaaaggtgtggtgacacttgaagagggaaaaagtgcagagaacgca
ctctacgttgtggaaggaatgcaatttgaccgtggttacatctcaccttactttgtgaca
gacagtgaaaaaatgtcagttgagttcgacaactgcaagttacttcttgttgacaagaaa
atcaccaatgcaagggatctcgttggtgttctggaggatgccattagaggcggataccca
attctaattattgcagaagacattgagcaggaggcattagcgacccttgtagttaacaag
cttagaggtacactgaagattgcagctctcagagctccaggatttggagagcgcaagagt
caataccttgacgatattgccattctcactggagcaactgtgattcgtgaggaagttggt
ctttcactagacaaagctggaaaagaggttcttggacatgccgcaaaggtcgtcctcaca
aaggagacgtcgaccattgtgggtgatgggagcacacaggaggcagtgcaaaagcgtgtt
acacagattaagaatcttattgagcaagcagagcaagattatgagaaggaaaaactgaat
gagagaattgcaaagctctctggtggagttgctgtgattcaggtgggagcacaaactgag
acagaactcaaagagaagaaactgagagttgaagatgctcttaatgctacaaaggctgct
gttgaggaaggtattgtcgttggtggtggttgtactctgcttcgccttgcttccaaggtt
gatgccattaaagccacccttgaaaatgatgaagaaaaggttggagcggatatcgtgaaa
agagcactgagttaccctctgaaactgattgccaagaatgctggagtcaacggaagcgta
gttagcgagaaggtgctttctaacgagaacgtgaaatacggttacaatgctgcaaccggc
aagtacgaggatttaatggctgcaggaatcattgatccaacaaaggttgtgagatgttgc
ttggaacacgcagcttcggttgcaaagacattcttgatgtcagactgtgttgttgttgag
atcaaggaacctgagccagttcccgcaggcaacccaatggacaactcaggatatggatac
tga
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