Brassica napus (rape): 125610089
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Entry
125610089 CDS
T04128
Name
(RefSeq) VPS35 endosomal protein sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
125610089
Membrane trafficking [BR:
bna04131
]
Protein recycling
Others
Retriever complex
125610089
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Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
125610089
NCBI-ProteinID:
XP_048637777
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Position
A6:complement(1808931..1815715)
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AA seq
910 aa
AA seq
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MEFEFRRRDYGADHESHLLPRSRTQKHPLSSPTASRQHQMKTVRDNDSPDFFDPLRGMDV
NASAEDKVEEEEEEDTSLSTEAVTQELTREWKSLKRILIQRFPVSKVISFSPISNVITKG
SKVETPSAQPHLEETGSEQASLEGTAKVMDQQEYLAKVRELIDGITKAWQVEDRVTSLKL
SIKVTKLLMDTTVLQFYPTVFVVVTDMLDMVGDMVWERIKEKAEHDVDGTVICTLPNDFQ
ASDICLEARETCYNWFCKVGSVRELLPRIYLELAILPCWRFLINQPREVLDRLVMMVRGL
ADPLASLYCRLYMVHRMQKLGFCNSGYLIKCVKDIEDVLAPILVDKDGCSYITDDKKLLF
NLMEPAIEYIMKCLLLTGRQENNVLGILEELGFGRNKSQPSDNSSHVSILLHHLLKALPS
EIVSSQAMEILHMIKCSNDCSFSQVLNYRLLGNRLCEGRSQEGFLSSLVNEIMQAASQYQ
MLYDYLRIMDAYVDLLLQNKMENHLDALLDDIVTLARDKFLSEEEQASLQSIILKLLSHF
EDLQKVLSLNHFIEILDLMSGTSKKSVNMHLLSMGTRNGCICDSTTVQLLFEVSQGLYDA
IDFVNIKDDDNRQTSHLISRFVEMVDYGVERERHLLFLAECRDAFSGIHELKETLVRSSN
TMAVKALKAEKKHINFVKSCLAFSEVTIPSVTIPTKQLNLYLETAEVALLGGLISHSDGL
LMSVVECLEDVTPPDGLKSIDADSMASVVCKLCSLLVMVPGNPEKGVIEILKSIFSATCS
SSRAMPRVKVKILCAIILLLSTLVQDNLPYRSANPEIIGNDLLFFGDSSYKNELVSWSQL
VVGELVDAIEQESSQIARGNIALEACNCISSALVMNEKVSQLCLRLLETAKGCLGATDRY
LEATKQSLQL
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgagttccggcgtcgcgactatggagctgaccatgaatctcatctccttcct
cgctcacgaactcaaaagcaccctctttcctctccaactgcttctcgtcaacaccagatg
aaaactgtcagagataacgattctcctgacttctttgatccattgaggggaatggatgtg
aatgcttcagcagaagacaaggttgaagaagaagaagaagaagatacttctctatccact
gaagcggtgactcaggagctgacaagggagtggaagtctcttaaacgtatcttgatccag
cgcttccctgtctccaaagtcatttctttttctccaatatctaatgtaataacgaaaggt
tccaaagttgagactccttccgctcaaccacatttggaggaaacaggcagcgaacaggct
tctctggaaggaactgctaaagtgatggaccaacaggaatatctagccaaagtacgcgag
ctaatagatggaatcactaaagcttggcaggttgaagatcgagtaacatcgttaaagtta
tcaataaaggtcacaaaacttctgatggacacaacagttttacagttttatcctacagtc
tttgttgtagtcacggacatgcttgatatggttggggatatggtgtgggaacggatcaag
gagaaagcagaacatgatgtagatggaacagtgatctgcaccttaccgaatgattttcaa
gcaagtgatatctgcctcgaagcaagagagacttgctataactggttctgcaaagttggt
tcagttcgagaacttcttccccgcatttacttggagctggcaattttaccttgctggcgt
ttcctcatcaatcaacccagagaagttctggatcgtttagtcatgatggtgagaggtctt
gcagatccactggcatctttgtattgtcgtctttatatggtgcatcgtatgcagaagttg
ggtttctgcaattcaggatatctaatcaaatgcgtcaaggatattgaagatgtattggca
cctattttagtggacaaggacgggtgttcctatattacagacgacaaaaagttgcttttt
aatttgatggaaccagccattgagtatataatgaagtgcttattgctcactggacgtcag
gagaacaatgtgttgggcatacttgaggagcttggatttggaaggaataaatctcagccg
tccgacaactcttcacacgtgtccattttacttcatcacctactcaaggcacttccatcc
gaaatagttagttcacaagctatggagatcctgcatatgattaaatgcagcaatgattgt
tctttcagtcaggttttgaattacaggttacttggaaataggttgtgtgaagggagatct
caagaaggttttctgagttcactcgtcaatgaaattatgcaggctgcttctcagtatcag
atgctgtatgactacttgagaattatggacgcatatgtggatctgttgttgcagaacaag
atggaaaatcatttggatgcgctcttggatgatattgtaactctagctcgtgacaagttt
ctttctgaagaagaacaagcaagtttgcaatccataattttgaagctgctgtctcatttc
gaggacttgcaaaaagtactttctctgaatcatttcatcgagatcttggatcttatgtcc
gggacttcaaaaaaaagtgttaacatgcatctcctgagcatgggtactaggaatggctgc
atatgtgattcaacaaccgtgcaattgctttttgaagtttctcagggtctttatgatgct
atagatttcgttaacataaaggatgatgataatcgacagacatcacatttaatttctcgc
tttgttgagatggttgattatggggtagaaagggaacgccatttgttgtttttggcggag
tgtcgtgacgcctttagtggtatacatgaacttaaggagacacttgtccgttcaagcaac
acaatggctgtaaaagcactaaaagcagaaaagaagcatatcaactttgtaaagtcttgt
ctagcattcagtgaagttaccattccatctgttacaattccaacaaaacagttaaatctt
tacctcgaaactgctgaggttgcgcttttaggtggtttgatttctcattccgatggactg
ctcatgtcagttgttgagtgtttagaggatgtgacgccaccagatggtttaaagtcaatt
gatgcggatagtatggcctccgtggtttgcaaattgtgtagcctcctggtaatggttcca
ggtaatcctgagaaaggcgtgatagagatcctcaagagcatattttctgctacttgctct
agttcacgggcaatgccgagagtgaaggtgaaaatactttgtgctatcattttactgttg
tcgacacttgtccaggataatctgccttaccgttctgccaatccagagataattggaaac
gatttactgttctttggtgattcatcatacaagaatgaacttgtctcttggagtcagcta
gttgtaggtgaacttgtagacgctattgagcaagaatcttcacagattgctcgcgggaac
attgcgcttgaagcttgcaattgcatatcatcagcactagttatgaatgagaaagtctca
caactttgcttgagactgctcgaaacagcaaaaggttgtttgggtgccacggacaggtac
cttgaagccaccaagcaatcactccagttatga
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