Brassica napus (rape): 125610304
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Entry
125610304 CDS
T04128
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 16
KO
K05391
cyclic nucleotide gated channel, plant
Organism
bna
Brassica napus (rape)
Pathway
bna04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
125610304
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bna04040
]
125610304
Ion channels [BR:
bna04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
125610304
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
125610304
NCBI-ProteinID:
XP_048638602
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Position
A6:10827637..10830982
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AA seq
706 aa
AA seq
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MSNLHLHTSARFRNFPTAFSRRHHNNNDLQNQRGRSVFSELGDTTLDPSGDLITRWNHIF
LITCLLALFLDPLYFYLPIVQAGTACMSIDIGFGILVTFFRTLADFSFLIHILLKFKTAF
VSKSSRVFGRGELVIDRREIAIRYLKSEFIIDLAATLPLPQIMIWFVIPNAGEFRYAAHQ
NHTLSLVVLIQYVPRILVMLPLNRRIIKATGVAAKTAWSGAAYNLVLYLLVSHVLGSVWY
VLSIQRQHECWRRECIKEMNATHSPSCNLLFLDCGSLRDPGRQAWMRITRVLSNCDARND
DDQHFQFGMFGDAFTNDVTSSPFFDKYFYCLWWGLRNLSSYGQSLAASTLSSETLFSCFI
CVAGLVFFSHLIGNVQNYLQSTTARLDEWRVRRRDTEEWMRHRQLPQELQERVRRFVQYK
WLTTRGVDEEAILRALPLDLRRQIQRHLCLALVRRVPFFAQMDDQLIDAICERLVPSLNT
KDTYVTREGDPVNEMLFIIRGQMESSTTDGGRSGFFNSITLRPGDFCGEELLTWALMPNI
NQNLPLSTRTVRTLSEVEAFALRAEDLKFVANQFRRLHSKKLQHAFRYYSHQWRAWGTGF
IQAAWRRYMKRKLAMELARQEEGDDYYYDDDDDDQYGGEDMPESSNNVDDNSSNNQNLSA
TILASKFAANTKRGVLGNQRGSSRIDPDDPTLKMPKMFKPEDPGFF
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacctccacctccacacctccgcacgcttccgcaatttcccgacggctttctcc
cgtcgccaccataacaacaacgacctccaaaaccaacgcggccgatccgttttctccgag
ctaggtgacacaaccctcgacccaagcggtgacctaatcacgagatggaaccacatcttc
cttataacctgcctcctcgcgctcttcctcgaccctctctacttttatctccctattgtc
caagccggaacggcctgtatgtccatcgacatcggtttcggcatcctcgtcaccttcttc
cgtaccctagccgatttctccttcctcattcacattctcctcaaatttaaaactgctttt
gtctccaaatcgtctagagtctttggtcgcggcgagcttgtcattgaccgccgtgaaatc
gccatccgttaccttaaatctgagttcattattgacctcgctgccacgcttcctcttcct
cagataatgatttggtttgtgatcccaaatgcgggagaattcagatacgcagcacatcag
aaccacacactttccttggtcgtcctgatacagtacgtgcctcgcatcctcgtcatgctt
ccactaaaccgtaggatcattaaagccactggagttgcagccaaaacagcctggtccggt
gcagcctacaatctcgtgctctacttacttgtgagccacgttcttggttcggtttggtac
gttttatcgatccagagacagcacgaatgctggagaagagaatgcattaaggagatgaac
gcaacgcattcaccgtcttgtaatctcttgtttctagactgtggatcgttgcgggatcca
ggcagacaagcttggatgcgcatcactcgggttctctctaactgcgatgcacgtaatgat
gatgaccaacattttcagtttggtatgtttggtgatgccttcactaatgatgtcacttct
tctcctttctttgataaatacttctactgtctttggtggggtctccgaaatctcagttct
tatggacagagtcttgcagctagtacattgagtagtgagactttattcagttgtttcatc
tgtgttgctggccttgttttcttctctcatctcattggcaatgttcagaactatctgcaa
tcgacaacggctaggttagatgaatggagagtgagaagaagagatacagaggaatggatg
cgacacaggcaattgccacaggagttacaagagcgtgtgaggcggttcgtccaatacaaa
tggttaaccactcgtggagtcgatgaagaagccatcctccgtgctctaccattggatctt
cgtagacagatccaacgtcatctctgtctcgctctagttcgccgtgtgccattctttgca
cagatggacgaccagctcatagacgcaatatgcgagcgtttagttccatcgttgaacacg
aaagatacatacgtgacacgggaaggcgatcctgtaaacgagatgcttttcataattaga
ggtcagatggaaagttcgactacagatggtggacggtcaggattctttaactcaatcacg
ctcagaccaggagatttctgtggtgaagagctcttaacttgggctttaatgccaaacatt
aaccagaatctccccttgtccacgagaaccgtgagaactctctctgaagtagaagctttc
gctctcagagcagaggacttaaagtttgtagctaaccaattcagacgcctccacagcaag
aaactccaacatgctttcagatactattcgcatcagtggagagcttggggaactggtttt
atacaagctgcatggagacgatacatgaagaggaagttagctatggagttagctaggcaa
gaggaaggagacgattactattatgatgatgatgatgatgatcaatacggaggagaggac
atgcctgaaagtagcaacaacgtagacgacaacagcagcaacaatcagaatttgagtgcg
acgatattagcgtctaagtttgcagctaatacgaagagaggtgttttagggaaccaaaga
gggtcttccagaattgatcctgatgatccaactttgaagatgcctaaaatgtttaaacca
gaggatccaggattcttctga
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