Bacillus cereus NC7401: BCN_0103
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Entry
BCN_0103 CDS
T01686
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bnc
Bacillus cereus NC7401
Pathway
bnc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bnc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BCN_0103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bnc03021
]
BCN_0103
03400 DNA repair and recombination proteins [BR:
bnc03400
]
BCN_0103
Enzymes [BR:
bnc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BCN_0103
Transcription machinery [BR:
bnc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BCN_0103
DNA repair and recombination proteins [BR:
bnc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BCN_0103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
BAL15896
LinkDB
All DBs
Position
117627..121211
Genome browser
AA seq
1194 aa
AA seq
DB search
MKIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPQKDWECHCGKYKRVR
YKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDMSPRALEEVI
YFASYVVTESGDTPLDKKQLLSEKEYRAYRDRYGSTFQAAMGAEAIKKLLQDIDLDKEVD
FLKEELKTAQGQRRTRAIKRLEVLEAFRNSGNEPSWMILDVLPVIPPELRPMVQLDGGRF
ATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGRRGRPVTGPG
NRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKEMALELFKPF
VMKELVEKGLAHNIKSAKRKIERVQPEVWDVLESVIKEHPVLLNRAPTLHRLGIQAFEPT
LVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSSEAQAEARLLMLAAQNILNPKDGKPVV
TPSQDMVLGNYYLTLEREGAIGEGMVFKDANEALLAYQNGYVHLHTRVAVAASAVNNATF
TEEQKSMLLLTTVGKLIFNEILPESFPYINEPTNSNLEKETPAKYFVEKGANIKEIIASR
EEVAPFSKKILGNIIAEVFKRFKITETSRMLDRMKNLGFKYSTKAGITVGVSDILVLGEK
DEILHEAQAKVDNVIKQFRRGLITEEERYDRVISIWSNAKDVIQGKLMKSLNKRNPIFMM
SDSGARGNASNFTQLAGMRGLMANPSGRIIELPIKSSFREGLTVLEYFISTHGARKGLAD
TALKTADSGYLTRRLVDVAQDVIVREDDCGTDRGLLIGAIKEGNEVIESLYDRLVGRFAR
KTVKHPETGEVLVAENQLITEDIAHIVENSGVETVNIRSAFTCNTRHGVCKKCYGRNLAT
GTDVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIFEARNPKGQA
VISEIDGVIAAINDVKDRQEVVVQGEVEARTYAIPYGARLKVIPGQKISHGKELTEGSID
PKELLKVTDITAVQEYLLREVQKVYRMQGVEIGDKHVEVMVRQMLRKVRVSDAGETDVLP
GTLLDIHQFTDANAKVLLQGKQPATARPVLLGITKASLETDSFLSAASFQETTRVLTDAA
IKGKRDELLGLKENVIIGKLVPAGTGMNRYRKVDLVKTTQDDMNVENDEVYVEQ
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgaagattggacttgcttcacctgacaagattcgttcttggtcatacggtgaagttaag
aaaccagaaacaattaactatcgtacgttaaagcctgaaaaagatggcttgttctgtgag
cgtattttcggaccacaaaaggactgggaatgtcattgcggaaaatacaaacgtgtacgt
tataaaggtgtagtttgtgatcgatgtggcgttgaagtaacgcgtgcgaaagtgcgtcgt
gaacgtatgggtcatatcgaattagctgctcctgtatctcatatttggtatttcaaaggt
atcccgagccgcatgggacttgtcttagacatgtcccctcgcgcgcttgaagaagtaatt
tatttcgcttcttatgttgtaacagaaagtggagatacaccacttgataagaagcaatta
ctttctgaaaaagaataccgtgcatatcgtgatcgatatggtagcacattccaagctgct
atgggtgcagaagcgattaaaaagctattacaagacatcgatttagataaagaagtagac
ttcttaaaagaagaattaaaaacagcacaaggacaacgccgtactcgtgctattaaacgt
ctagaagtattagaagcattccgtaactctggaaatgagccatcttggatgatcttagat
gttctaccagtaatcccaccagaactacgaccaatggtacagttagatggtggacgtttt
gctacttctgacttaaacgacttataccgtcgtgtaattaaccgtaacaaccgtttaaaa
cgtctattggacttaggtgcaccaagcattatcgttcaaaacgaaaaacgtatgttacaa
gaagctgtagacgcattaatcgataatggtcgtcgtggccgtccagttactggaccaggt
aaccgtccattaaaatctctatctcacatgcttaaaggtaaacaaggacgtttccgtcaa
aacttattaggtaaacgtgttgactactctggtcgttctgtaatcgttgtaggaccgaac
ttaaagatgtatcaatgtggattaccgaaagagatggcgcttgaactgttcaaacctttc
gtaatgaaagagttagttgaaaaaggattagcacacaacattaagagtgcgaaacgtaaa
atcgagcgtgtacaacctgaagtttgggacgttttagaatctgtgattaaagaacatcca
gtacttctaaaccgcgcaccaacacttcaccgtcttggtattcaggcgtttgaacctaca
ttagtagaaggtcgcgcaatccgtcttcacccacttgtatgtactgcatacaacgcggac
tttgacggtgaccaaatggccgttcacgtacctttatcatcagaagcacaagcagaagct
cgtcttcttatgttagcggcacaaaacatcttgaacccgaaagacggtaaaccagttgtt
actccatctcaggatatggtattaggtaactactacttaacacttgagcgtgaaggtgca
atcggtgaaggtatggtcttcaaagatgcgaacgaagcattacttgcatatcaaaatgga
tatgtacatcttcatacgcgtgttgcagtagctgcaagtgcagtaaacaacgcaacattt
actgaagagcaaaagagtatgcttctattaacaacagttggtaaattaatatttaacgaa
atcttaccagagtcgttcccttatattaatgaaccaacaaattcaaaccttgaaaaagaa
acaccagcgaaatatttcgttgaaaaaggtgcgaatattaaagagattattgctagtcgc
gaagaagtggcgccattcagcaagaaaatccttggtaacatcattgcggaagtgtttaaa
cgtttcaaaattacagaaacgtctcgcatgcttgaccgtatgaaaaacttaggattcaag
tactctacaaaagctggtattacagttggggtatctgacattcttgtattaggtgaaaaa
gatgaaattctccacgaagcacaagcaaaagtagataatgtaattaaacaattccgtcgc
ggtttaatcacggaagaagaacgttacgatcgcgttatctctatttggagtaatgcaaaa
gatgttatccaaggaaaactgatgaagtccttgaataaacgcaacccaatcttcatgatg
agtgattccggtgcccgtggtaacgcatcgaactttactcagcttgctggtatgcgtggt
ctgatggccaatccatctggtcgtatcatcgaacttccaatcaaatcaagtttccgtgaa
ggtttaacagtacttgagtacttcatctctacgcatggtgcgcgtaaaggtcttgccgat
acagcactgaaaactgccgattctggttacttaacacgtcgtcttgttgacgttgcacaa
gatgtaatcgttcgtgaagatgattgtggaacagatcgcggtttattaattggtgcgatt
aaagagggtaatgaagttattgagtcattatatgatcgtcttgttggacgttttgcaaga
aaaactgtaaaacatcctgaaacaggtgaagtattagttgctgaaaatcaattaattact
gaagatatcgctcatatcgttgaaaattcgggtgttgaaactgtaaacattcgttcagcg
tttacgtgtaacactcgccacggtgtatgtaagaagtgttacggtcgtaacttagcaact
ggaacagacgtagaagtaggggaagcggtaggtattatcgcagctcaatctatcggtgag
ccaggtacacagttaacgatgcgtacgttccatacaggtggggttgccggagatgatatc
actcaaggtttacctcgtatccaagagatcttcgaagctcgtaatccgaaaggtcaggct
gttatcagtgaaatcgacggtgttatcgcagcgatcaacgatgttaaagatcgccaagaa
gtagttgtacagggtgaagttgaagctcgtacgtatgctattccttacggtgctcgtctg
aaagtaattccaggacagaaaattagccacggtaaagagttaacagaaggttctatcgat
ccgaaagaattactaaaagtaacggacattacggcagttcaagaatacttattacgtgaa
gttcaaaaagtataccgtatgcaaggggtagaaattggtgacaaacacgtagaagtaatg
gtacgccaaatgttacgtaaagtacgtgtgagtgatgcaggtgaaacagatgtattacca
ggaacattactagatatccatcagtttactgatgcgaatgcgaaggtgttactgcaaggt
aaacaaccagcaacagctagaccagttctgcttggtattacaaaagcttcacttgaaaca
gattcattcttatctgcagcatcgttccaagaaacaactcgtgtcttaactgatgcagcg
attaagggtaaacgcgatgagcttctaggattgaaagaaaatgttattatcggtaaactt
gttcctgctggaacaggtatgaatcgttatcgcaaagtggatcttgttaaaacaacacaa
gatgacatgaatgtagaaaacgatgaagtttatgtggaacagtaa
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integrated database retrieval system
