Brevundimonas nasdae: KWG56_02065
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Entry
KWG56_02065 CDS
T07529
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bnd
Brevundimonas nasdae
Brite
KEGG Orthology (KO) [BR:
bnd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bnd03032
]
KWG56_02065
03400 DNA repair and recombination proteins [BR:
bnd03400
]
KWG56_02065
Enzymes [BR:
bnd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KWG56_02065
DNA replication proteins [BR:
bnd03032
]
Prokaryotic type
DNA Topoisomerases
KWG56_02065
DNA repair and recombination proteins [BR:
bnd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KWG56_02065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
PB1
Motif
Other DBs
NCBI-ProteinID:
QYC10821
LinkDB
All DBs
Position
complement(425494..426516)
Genome browser
AA seq
340 aa
AA seq
DB search
MGDGSQRFDVAVEVPPGLSWCSDDNPGLSRRRAGKGWSYRDAKGQVVNDARVLARIRALA
IPPAWTDVWICPRANGHIQATGRDVKGRKQYRYHADWSTARSENKFDRLPAFCRALPKLH
AQIEHDLGLRGVCKPKVLATAVRLLEITLIRVGNAEYARQNRSYGLTTLHKRHLDVDGAA
LTFEFRGKSGKDHCVSVNDRRLARILRALEDLPGQQLFKYRAADGDLCPITSDDVNAYIH
AAMGEQFSAKDFRTWAGTVSAARALRVETPPTSPTDARRTITRCIKAVSGLLGNTPAVCR
SSYIHPRVFDLFEAGLLAEQLPGPNAQAFERTLVRVLSRP
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacggatcacagaggttcgatgtcgccgtcgaggttccgcccggcctcagctgg
tgcagcgacgacaaccccggtctcagccgtcgtcgcgcgggcaagggctggtcctatcgc
gacgccaagggtcaggtcgtgaacgacgcccgcgtcctggcgcgcatccgcgccctggcc
atcccgcccgcctggaccgacgtgtggatctgccccagggcaaacggccatatccaggcg
acgggccgcgacgtgaagggccgcaaacagtaccgttatcacgccgactggagcacggcc
cggtccgaaaacaagttcgaccgcctgcccgccttctgccgcgccctgcccaaactccat
gcccagatcgagcacgacctgggcctgcgcggcgtctgcaagcccaaggtgctggccacc
gcggtgcgcctgctggagatcaccctgatccgcgtcggcaacgccgaatacgcccgtcag
aaccgcagctatggcctgaccaccctgcacaagcgtcatctggatgtggacggcgccgcc
ctgaccttcgagtttcgcggcaagagcggcaaggaccactgcgtcagcgtcaacgaccgc
cgcttggcccggatcctgcgcgcgctggaggacctgccgggtcagcagctgttcaaatac
cgcgcggcggacggcgacctgtgccccatcacctccgacgatgtgaacgcctatatccac
gccgccatgggcgaacagttctcagccaaggactttcgcacctgggccggaacggtttcc
gccgccagggcgctgcgtgtcgagacgcccccgacctcgcccaccgacgcccggcgcacc
atcacccgctgcataaaggcggtgtccggccttctgggaaacacccccgccgtctgccgc
agttcatacatccacccgcgcgtgttcgatctgtttgaagcggggctattggctgagcag
ttgcccggtccgaacgcacaagcctttgaacgcactctggtcagggttctatcccggccc
tga
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