Brevundimonas nasdae: KWG56_03495
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Entry
KWG56_03495 CDS
T07529
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bnd
Brevundimonas nasdae
Brite
KEGG Orthology (KO) [BR:
bnd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bnd03016
]
KWG56_03495 (rnd)
Enzymes [BR:
bnd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
KWG56_03495 (rnd)
Transfer RNA biogenesis [BR:
bnd03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KWG56_03495 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QYC11088
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All DBs
Position
707182..708333
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AA seq
383 aa
AA seq
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MTPITTNEALAEFCARLSTAPFITVDTEFMRETTYWPRLCLIQAASSEHAGIIDPMAEGL
DLEPFLNLLRDEKIVKVFHACRQDVEIFVRLGAMPKPMFDTQVAAMAAGFGEQVAYDSLV
RQMLRIEVDKGSRFTDWGRRPLSESQLVYALGDVTHLAALYPKLRDRLAKEGRLDWVTTE
MEGLVDPAIYDTNPENAWKRLKPKKFSAKYLAAFKAVAVWRERAAQERDQPRGRILKDEG
IDEIAQQTPTDTEAFNRLRSVPKGFGGSRLGLELAEELKRVLADPEAHAPEMERPAHRQP
APPSVVELLKVLLKAKSDNAGVASKLIATSADLEKIAISDDADVEAMKGWRRQLFGEDAL
KLKRGEIALVLSGSRVEVVEIEG
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacgccaatcaccaccaatgaggcgctggccgagttctgcgcccgcctgtccaccgcc
ccgttcatcacggtcgacaccgagttcatgcgggagacgacctattggccgcgcctgtgc
ctgattcaggcggcgtccagcgaacatgccggaatcattgatccgatggccgagggcctg
gaccttgagcccttcctgaacctgctgcgtgacgagaagatcgtgaaggtctttcacgcc
tgcagacaggatgttgaaatcttcgtgcgtctgggcgcgatgcccaagccgatgttcgac
acccaggttgcggcgatggcggcgggctttggcgaacaggtggcctatgattcgctggtt
cgccagatgctgcgcatcgaggtggacaagggcagccgcttcaccgactggggccgtcgc
ccgttgtcggaaagccaactggtctatgccctgggcgacgtgacccatctggcagccctt
tatcccaagctgcgcgaccggctggccaaggaggggcgtctggactgggtgacgaccgag
atggaaggtctggtcgatccggccatctatgacaccaatcccgagaacgcgtggaagcgt
ctgaagcccaagaagttctcggccaagtatctggctgcgttcaaggctgtcgctgtctgg
cgcgaacgcgctgcacaggagcgtgaccaaccgcgcggccgcatcctcaaggacgagggc
atcgacgagatcgcccagcagacgccgaccgacaccgaggccttcaaccgtctgcgttcg
gtgccgaagggttttggcggatcgcgcctgggcctggagctggccgaagagctgaagcgt
gtcctggctgatcctgaggcgcatgccccggaaatggagcgcccggcccaccgtcagccc
gcgccgccgtcggtggtggaactgctgaaggtgttgttgaaggccaagagcgacaatgcg
ggcgtggcctccaagttgatcgccacatcggccgatctggagaagatcgccatcagcgac
gacgccgatgtcgaggccatgaagggctggcgccgtcagttgttcggtgaggacgccttg
aagctgaagcgcggcgaaatcgccctggtcctcagcggatcgcgcgtcgaggtcgtggaa
atcgaaggctag
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