Brevundimonas nasdae: KWG56_05090
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Entry
KWG56_05090 CDS
T07529
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bnd
Brevundimonas nasdae
Pathway
bnd03410
Base excision repair
bnd03430
Mismatch repair
bnd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bnd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KWG56_05090 (recJ)
03430 Mismatch repair
KWG56_05090 (recJ)
03440 Homologous recombination
KWG56_05090 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bnd03400
]
KWG56_05090 (recJ)
DNA repair and recombination proteins [BR:
bnd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
KWG56_05090 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KWG56_05090 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KWG56_05090 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Peripla_BP_6
Glu_dehyd_C
YrzO
Motif
Other DBs
NCBI-ProteinID:
QYC11361
UniProt:
A0ABX8TJK5
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All DBs
Position
complement(1046154..1047971)
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AA seq
605 aa
AA seq
DB search
MADDSGSQTLNAFLGVSRSLSGRAWRQRPADAATTRAHMQGLGLEEPLARALASRGVRAD
QGTDFLAPTLRALFPDPSSFMDMDAAADAILDALQAKASIHVFADYDVDGASSAALLVRW
FRSVGAELPIYVPDRIKEGYGPSAAAFDTLKASGADLVVTVDCGAAANEALAHAHSIGLN
VVVIDHHLMRHEPPKALAVVNPNRPGCNSGQGNLAAAGVVFVLLAALNREGRKRGLFANQ
PEPDIRQWLDLAALGAICDVTGLTGFNRALTGLGLKVMSDWKNPGLRALLAAAGAEQGPA
KSNHAGFILGPRINAGGRIGRSDLGARLLSTDDPVEAERLAIELDALNLSRRDVEKAVTD
AAVRKVEATGAHADESAVVVVAGDDWHPGVVGIVAGRLRERWRKPVIVVGVDPVTGLGKG
SGRSQPGMNLGRAIQAAWEEGILLAGGGHAMAAGLTVDSARLGELTAFLNDRLAHERIEA
VAQDWLEIDALIEPAGANRALFESFEQLAPFGPANPEPVFALTGVQAREPVQMNGGHVRC
RLVGPDGSSVRAIAWRCADLPGGQALLSGQGGLSIVGRLKADDWNGRRGVQFEIEDVSDP
RMIQG
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgatagcggctctcaaaccctgaacgcatttctgggcgtctcgcgctccctt
tcgggtcgtgcctggcgacagcgaccggctgacgccgcgaccacccgcgcccatatgcag
ggcctgggactggaagagccgctggcccgcgccctggcctcacgcggcgttcgcgccgac
cagggcaccgactttctggccccgaccctgcgcgccctgtttcccgatccctccagcttc
atggacatggacgccgccgccgacgccattctggatgcgctgcaagccaaggccagcatc
cacgtcttcgccgactatgatgtggacggcgcctccagcgcagccctgctggtgcgctgg
ttccgttcagtcggcgcggaactgcccatctatgtccctgaccggatcaaggaaggttat
ggccccagtgctgcggccttcgacacactgaaggcgtcgggcgctgatctggtcgtcacg
gtcgactgcggcgcggcggcgaatgaggccttggctcacgcccacagcatcggcctgaat
gtcgtggtcatcgaccaccacctgatgcgccacgaaccgcccaaggcgctggcggtcgtc
aacccgaaccgccccggctgcaactcgggccagggcaatctggcggcggcgggcgtggtc
ttcgtcctgctggccgccctgaaccgcgaaggccgcaagcgcggcctcttcgccaatcag
cctgagcccgacatccgtcagtggctggatctggctgcgctgggcgccatctgcgacgtg
accggcctgaccggtttcaaccgcgccctgaccggtctgggcctgaaggtcatgagcgac
tggaagaaccctggactgcgcgccctgctggcggcagccggcgcggagcaggggccagcc
aagagcaatcacgcgggcttcatcctggggccgcgcatcaatgcgggcggacgcatcggg
cgctctgatctgggcgcgcggctgctgtccaccgatgatccagtcgaggccgaacgtctg
gccatcgaattggacgcgctgaacctgtcacgccgcgatgtggagaaggcggtcaccgac
gccgccgtgcgcaaggtcgaggcgaccggcgcccatgccgacgaatcggctgtggtcgtc
gtggcgggcgacgactggcatcccggcgtggtcggcatcgtcgccggacgcctgcgcgaa
cgctggcgcaagcccgtcatcgtcgtcggcgtcgatcctgtaacgggcctgggcaagggc
tcgggccgttcgcagccgggcatgaacctgggccgggccattcaggcggcctgggaggag
ggcatccttctggcgggcggcggtcacgccatggcggccggtctgacggtcgacagtgcg
cgtctgggggaactgaccgccttcctcaacgatcggcttgcccatgagcggatcgaggcg
gtggcgcaggactggctggagatagacgccctgatcgaaccggcgggcgcaaaccgggcc
ctgttcgaatccttcgaacagttggcgcccttcggtcccgccaaccctgaacccgtcttc
gccctgaccggggtgcaggcgcgtgaacccgtgcagatgaacggcggccatgtccggtgc
cgtctggtcggccccgacggcagttctgtacgcgccatcgcctggcgctgcgccgatcta
ccgggcggacaggcgctgctgtcagggcaggggggcttgagcattgtcgggcggctgaaa
gccgacgactggaatggtcggcgcggtgttcagttcgagattgaggacgtgtccgatccg
cgcatgatccagggctaa
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