KEGG   Brevundimonas nasdae: KWG56_08525
Entry
KWG56_08525       CDS       T07529                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
bnd  Brevundimonas nasdae
Pathway
bnd00010  Glycolysis / Gluconeogenesis
bnd00020  Citrate cycle (TCA cycle)
bnd00260  Glycine, serine and threonine metabolism
bnd00280  Valine, leucine and isoleucine degradation
bnd00310  Lysine degradation
bnd00380  Tryptophan metabolism
bnd00620  Pyruvate metabolism
bnd00630  Glyoxylate and dicarboxylate metabolism
bnd00640  Propanoate metabolism
bnd00670  One carbon pool by folate
bnd00785  Lipoic acid metabolism
bnd01100  Metabolic pathways
bnd01110  Biosynthesis of secondary metabolites
bnd01120  Microbial metabolism in diverse environments
bnd01200  Carbon metabolism
bnd01210  2-Oxocarboxylic acid metabolism
bnd01240  Biosynthesis of cofactors
Module
bnd_M00009  Citrate cycle (TCA cycle, Krebs cycle)
bnd_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bnd_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
bnd_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
bnd_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:bnd00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    KWG56_08525 (lpdA)
   00020 Citrate cycle (TCA cycle)
    KWG56_08525 (lpdA)
   00620 Pyruvate metabolism
    KWG56_08525 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    KWG56_08525 (lpdA)
   00640 Propanoate metabolism
    KWG56_08525 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    KWG56_08525 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    KWG56_08525 (lpdA)
   00310 Lysine degradation
    KWG56_08525 (lpdA)
   00380 Tryptophan metabolism
    KWG56_08525 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    KWG56_08525 (lpdA)
   00670 One carbon pool by folate
    KWG56_08525 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bnd04147]
    KWG56_08525 (lpdA)
Enzymes [BR:bnd01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     KWG56_08525 (lpdA)
Exosome [BR:bnd04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   KWG56_08525 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored NAD_binding_8 Pyr_redox_3 AlaDh_PNT_C GIDA HI0933_like FAD_binding_2 XdhC_C DAO UDPG_MGDP_dh_N Thi4 Lys_Orn_oxgnase Lycopene_cycl 3HCDH_N
Other DBs
NCBI-ProteinID: QYC11967
UniProt: A0ABX8TM72
LinkDB
Position
1746106..1747518
AA seq 470 aa
MSRSTTSYDLVIIGGGPGGYPCAIRASQLGLSVAVIDDRELLGGTCLNIGCIPSKALLQA
TERLEMARNLEAFGVMVDNVRADLDGVMRHKGKVVTELGEGVAYLLRKHKVARFQGRGRL
LARDRVEVRAADGAFEVQASKAVVIASGSEAATLPDLPIDERRIVTSAGALSLTAAPRHL
AVIGGGYVGLELGSVWRRLGSEVTVIEVLDRIASGVDSEMSAALHKVLEAQGFQFCLGHK
VVGSRMEGDDVVLDVEPMGDGARGTIKADVVLVSIGRRPATARLDLETVGIAPDRRGFIP
VDEGFRTSADGVYAIGDVIGGAMLAHKAEEEGIALAERLAGGAGHVDYGTIPAVVYTWPE
LASVGRTEDDLKAAGVAYRVGRFPFSANAMAKARLEKNGLVKVLADAATDKILGVHILGP
EAGGLIHEAVAAMQFGAAAEDLARTSHAHPTLPEALREACLAVAERTIHL
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgagccgttcgacgacctcctacgacctggtgatcatcggcggcgggccgggcggatac
ccgtgtgcgatccgggcgagccagctcggcctgtcggtggcggtcatcgacgaccgcgaa
ctgctcggggggacctgcctgaacatcgggtgcattccgtccaaggcgctgctccaggcc
accgagcggctggagatggcgcgcaatctcgaagcgttcggcgtcatggtagacaatgtg
cgggccgatcttgacggtgtcatgcggcacaagggcaaggtggtgaccgagcttggcgaa
ggggtcgcctacctcctgcgcaagcacaaggtcgcccgcttccagggccgcgggcggctg
ctggcgcgcgaccgggtggaggtgcgcgccgcggacggcgctttcgaggtgcaggccagc
aaggcggtggtcatcgccagcggatcggaagcggcgaccttgcccgacctgcccatcgac
gagcggcgaatcgtcacctccgccggcgccctgagcctgacggcggcgccgcgccatctg
gcggtgatcggcggcggctacgtcggactggagctggggtcggtctggcgtcggctcggc
agcgaggtcacggtcatcgaggtgctcgaccggatcgcctccggcgtcgactcggagatg
tcggcggcgctgcacaaggtgctcgaggcccagggcttccagttctgccttgggcataag
gtggtcggatcgcggatggagggcgacgacgtcgtcctcgacgtcgagcccatgggcgat
ggcgcgcgaggaaccatcaaggccgatgtcgtgctggtctccatcggccgacggcccgca
accgccaggctcgatctggaaacggtcggcattgcgcccgaccgcaggggctttattccg
gtggacgaagggttccggaccagcgccgacggggtctacgccatcggcgacgtcatcggc
ggcgccatgctggcccacaaggcggaggaggaagggatcgccctggccgaacgcctggcg
gggggcgcgggccatgtggactacggaacgattccggcggtcgtctatacctggccggaa
ctggcttcggtcggccgcaccgaggacgacctcaaggcggccggcgtggcctaccgcgtg
gggcgcttccccttctccgccaacgccatggccaaggcgcgtctggagaagaacggtctg
gtcaaggttctggccgacgccgcgacggacaagatcctcggcgtgcacatcctgggccct
gaggccggcgggttgatccatgaagcggtcgccgccatgcagttcggcgcggcggccgag
gatctggcgcggacaagccacgcccatccgaccctgccggaagccctgcgcgaagcctgc
ctggcggtagccgagcgcacgatccacctctga

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