Brevundimonas nasdae: KWG56_09475
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Entry
KWG56_09475 CDS
T07529
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
bnd
Brevundimonas nasdae
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_50
HTH_7
AAA
AAA_16
dnstrm_HI1420
AAA_2
HTH_17
TetR_N
HTH_23
Phage_CP76
HTH_29
HTH_IclR
AAA_22
HTH_28
RWP-RK
CENP-B_N
AAA_19
nSTAND3
HTH_22
GlnR_1st
Motif
Other DBs
NCBI-ProteinID:
QYC08877
LinkDB
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Position
1942446..1943897
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AA seq
483 aa
AA seq
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MAKTVLVVDDDPTQRRLLQAVLERDGYAVVHAVNGGEAIDRMTKGGGADVILLDMIMPEM
SGMECLAEMRSAGVTTPVIVLTANGGIDTVVKAMQAGAQDFFVKPVSPERLLIGVRNALQ
LTQLTAEVGRLTKRALGRASFDDIVGDGPAMRMVKALGARAAKSSIPVLITGESGVGKEV
IARALHGASERAGKPFVAVNCGALPANLAESILFGHEKGAFTGAHEKTLGKFREADGGTL
FLDEIGELPLDLQVKLLRALQESEIDPVGGKRPVKIDVRIVSATNRDPGQQVKDGAFRED
LFYRLNVFPIEAPSLRERREDIPALIDHFIARFNAEEGKRIVGCAPETLAMLQAHDWPGN
VRQLENAVFRAIVLADAPFLQPHDFPAISGLAAPMPDSVPSAAAVASVAHSDLAALPDQP
IRILDERGHLRTLEEIERDLIQHAIEVYAGHMSEIARRLGIGRSTLYRKVREQGLEEQLK
EAG
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaccgttctggtcgtcgatgacgatccgacccagcgccgactgctgcaggcc
gtgctggagcgtgacggctatgcggttgtgcacgccgtcaacggcggcgaggccatcgac
cgcatgaccaagggcggcggcgccgacgtcatcctgctggacatgatcatgccggagatg
tcgggcatggaatgcctggccgagatgcgcagcgcaggcgtcaccacgccggtcatcgtg
ctgacggccaacggcggcatcgacaccgtggtcaaggccatgcaggcgggcgcccaggac
ttcttcgtcaagccggtcagcccggagcggctgctgatcggggtgcgcaacgccctgcag
ctgacgcagctgacggccgaggtcggacgcctgaccaaacgcgccctgggccgggccagt
ttcgatgacatcgtcggcgacggccccgccatgcggatggtcaaggcgctgggcgcgcgg
gcggccaagtcctccatccccgtcctgatcaccggcgaaagcggcgtgggcaaggaggtc
atcgcccgcgccctgcacggcgccagcgagcgcgccggcaagccgttcgttgcggtcaac
tgcggcgccctgcccgctaacctggccgagtcgattctgttcggtcatgagaagggcgcc
ttcaccggggcgcacgagaagaccttgggcaagttccgcgaggcggacggcggcaccctg
ttcctggacgagattggcgaactgccgctggaccttcaggtcaagctgctgcgcgccctg
caggaaagcgagatcgaccccgtcggcggcaagcgtccggtcaagatcgacgtccgcatc
gtctcggcgactaatcgcgatcccggccagcaggtaaaggacggcgccttccgcgaagac
ctgttctatcgcctgaacgtgtttccgatcgaggccccctccctgcgtgagcggcgcgag
gacattccggccctgatcgaccatttcatcgcccgcttcaatgccgaggaaggcaagcgg
atcgtcggctgcgcgccggaaaccctggccatgctgcaggcccacgactggcccggcaat
gtgcgccagcttgagaacgccgtgttccgcgccattgtcctggctgacgcccctttcctg
caaccgcacgatttccccgccatctcgggcctcgccgcccccatgcccgacagcgtcccg
tcagcggcggcggtcgcatccgtggcccacagcgacctggccgccctacccgaccagccg
atccgcatcctggacgagcgcggccatctgaggacgttggaagagatcgaacgcgacctg
atccagcacgccatcgaggtctatgccggccatatgagcgagatcgcccgccgcctcggc
atcggccgctcgaccctgtaccgcaaggtccgcgaacaggggctggaggagcagttgaag
gaagcgggctag
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