Brevundimonas nasdae: KWG56_10680
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Entry
KWG56_10680 CDS
T07529
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bnd
Brevundimonas nasdae
Pathway
bnd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bnd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KWG56_10680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bnd03019
]
KWG56_10680
Enzymes [BR:
bnd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KWG56_10680
Messenger RNA biogenesis [BR:
bnd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KWG56_10680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QYC09097
LinkDB
All DBs
Position
2176820..2178367
Genome browser
AA seq
515 aa
AA seq
DB search
MAESALPHAKDTAVSITFESMGLNKALLQALTATGYTKPTPIQEKAIPDVMLGKDLLGIA
QTGTGKTAAFALPILHRLAENRTPPVPRTTRALILSPTRELATQIGDSFKAYGAHLGFRV
AVIFGGVKYGAQERALQQGLDILVAAPGRLLDHIQQKTLDLSSTEIFVLDEADQMLDLGF
IKPIRQIVSRMPARRQNLFFSATMPSEIGKLAGELLKDPVKVQVTPQSTTVQRISQSVVY
IEQGKKRALLTEMFSDPEYKRCLVFTKTKHGADKVAAYLETGGVEAGAIHGNKSQPQRER
TLEAFKKGKLRVLVATDIAARGIDVDGVSHVVNFELPHVPESYVHRIGRTARAGKDGTAV
SFVAGDEMKLLRDIEKVTRQKIPAADRRNDKQLAALDASIMSAGVAKKATLPEREGGERN
EGGRGGRGRRNPHRDGVRPEGGGQPHRKRRGDRGGEAAAARPEKTYNPMAGEKTTPREPR
QSDPRKSEPRAEGELKRRPRRRPSNGGKGYGAAKG
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaagcgccctgccgcacgcgaaagacactgctgtgagcatcacattcgaatcc
atgggcctgaacaaggcccttcttcaggccctgaccgcgaccggctacaccaagcccacg
ccgatccaggaaaaggccatccctgacgtcatgctgggcaaggacctgctgggcatcgcc
cagaccggcaccggcaagaccgccgccttcgccctgccgatcctgcatcgcctggccgag
aaccgcaccccgcccgtgcctcgcaccacgcgcgccctgatcctgagcccgacgcgcgaa
ctggccacccagatcggcgacagcttcaaggcctacggcgcccacctgggcttccgggtc
gcggtcatcttcggcggcgtgaagtacggcgcccaggaacgcgccctgcaacagggcctg
gacatcctggtcgccgcgccgggccgtctgctggaccatatccagcagaagacgctggac
ctgtcctcgaccgaaatcttcgtgctggacgaagccgaccagatgctggacctgggcttc
atcaagccgatccgccagatcgtcagccgcatgcctgcgcgccgtcagaacctgttcttc
tcggcgaccatgccgtccgagatcggcaagctggcgggtgaactgctgaaagacccggtc
aaggttcaggtcaccccgcaatccaccaccgtccagcgcatcagccagtcggtcgtctat
atcgaacagggcaagaagcgcgccctgctgaccgagatgttcagcgacccggaatacaaa
cgctgcctggtcttcaccaagaccaagcacggcgccgacaaggttgcggcctatctggag
accggcggcgtcgaagccggcgcgatccacggcaacaagtcccagccccagcgtgaacgc
acgctggaagccttcaagaagggcaagctgcgcgtcttggtcgccaccgacatcgccgcg
cgcggcatcgacgtggacggcgtctcgcacgtcgtgaacttcgaactgccgcacgtgccg
gagagctatgtccaccgcatcggccgtacggcccgcgcaggcaaggacggcaccgccgtc
agcttcgtggctggcgacgaaatgaagctgctgcgcgacatcgaaaaggtcacgcgtcag
aagatcccggctgcggatcgccgcaacgacaagcagctggcggctctggacgcctccatc
atgtcggcgggcgtggccaagaaggcgaccctgccggaacgtgaaggcggcgaacgcaac
gagggcggccgcgggggccgcggccgtcgcaacccgcatcgcgacggcgtgcgtccggaa
ggcggcggccagcctcaccgcaagcgtcgcggcgatcgcggtggcgaagcggcggcggcg
aggcctgagaagacctacaacccgatggctggtgaaaagaccacgccgcgcgaaccccgc
cagtcggatccccgcaagagcgagccgcgtgccgagggcgaactgaagcgccgcccccgt
cgccgcccgtcgaacggcggcaagggctacggcgccgccaagggctga
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