Brevundimonas nasdae: KWG56_12380
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Entry
KWG56_12380 CDS
T07529
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bnd
Brevundimonas nasdae
Brite
KEGG Orthology (KO) [BR:
bnd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bnd03400
]
KWG56_12380 (addB)
Enzymes [BR:
bnd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KWG56_12380 (addB)
DNA repair and recombination proteins [BR:
bnd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
KWG56_12380 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QYC09394
LinkDB
All DBs
Position
2544633..2547722
Genome browser
AA seq
1029 aa
AA seq
DB search
MTAFDPFGGSGPRWHAIPAHRPFLEDLAAGVLAWLGELPPETLSDATILLPNRRAARAFT
GALSKLADGRPVLLPQVRPLGDLEEDEPPFTPGALGLDLAPAIAPLTRRFEMARMIVEQF
DSDLTPMRALDLADALGGFLDSCQLEEVPDPERVAKLVDGEMAEHWERSADFLSLGVVAW
PKRLAELGLVDPAWRRATLLRRLADLWDAHPPSQPVIAAGSTGTVPAAADVLGAVARAPL
GCVVLPGLDPDLDDRVWDQIDEENEQHPQRALKRLLERHGIHRHAVRPWFQPPVPPQTEQ
RGLARQRLLNEALRPADATGDWREAIRDIRARAVEAGRAADPIAEGLQGLSVLNLRHDEE
TAAAIALMMRETLETPGKTCALVTPDQGLGRRVAARLERWGVVPDASAGQPLNRMPAGVL
VELCVRWIAAPTDPQVLLGLLKHPLVQLDLGEIDAARAVVAFEDMALRGPRHASFARLKR
KLDHALSPDRDGAPPSEGRLKRHAQARALGDHLEGLITTARASFSPDAPLDAAARALTVL
IEALAGQNAWAGPDGECAAGLLSNLITGGASLGVVSTSDLVELIKGLLADAVVRTGGATH
PSLRILGAIEARLVRADRMILAGLEEGVWPQGAPVDPFLSRPMRKALGLPPPERRIGQSA
QDFVQAACADEAILIHTERRGGQPAVRSRWLWRLDMLTRGANMAETPVAVSAPAHVADWI
RALDAPLRDTPDYARRPAPTPPVDRRPRNLPVTGIERWVRDPYAVYAQRILGLKVLDRPG
ASAEAMARGNAIHEAIEQMVRVWPDVLPEDCADQIADFIMTAMTDAGFEDAALARERPLA
RNAALWLERFERERRARGATLLIEQSGAVVFDAPAGPFTVTARADRIELDANGAAVLDFK
TGQTPSQKQVVQGFAPQLTLTAAILAEGGFDAPPTEATELLYVKVTGRRDPGKVDDVSRQ
GRGNTQTAAQMAARELDRLKLGVAAFDDEATPYTSWVAPQFMGNFGGNYDHLARVWEWHV
VGGEDEAPE
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcgttcgatcccttcggcgggtcgggcccacgatggcacgccattccggcgcat
aggcccttcctcgaagacctggcggcgggggtgctggcgtggctgggcgaactgccgccc
gagaccctctcggacgcgaccatactgctgcccaaccgccgggcggcgcgggccttcacc
ggggcgctgtccaagctggcggacgggcggcccgtgctgctgccgcaggtgcggcctctg
ggcgatctggaggaggacgagccgcccttcacgcccggcgccctgggcctggaccttgcg
cccgccatcgcccccctgacgcgccggttcgagatggcgcggatgatcgtggagcagttc
gacagcgatctgacgccgatgcgggcgctggatctggcggacgccctgggcggtttcctg
gattcctgccagttggaggaggttcccgatcccgaacgggtcgccaaactggtcgacggc
gaaatggccgaacactgggagcggtccgccgacttcctgagcctgggcgtcgtcgcctgg
ccgaagcggctggccgaactgggcctggtcgatccggcgtggcggcgcgccacactgctg
cgccgtctggccgacctgtgggacgcccatccgcccagccagccggtcatcgccgccgga
tcgaccggcaccgtgcccgcagccgccgacgttctgggcgccgtggcccgcgcgcctctg
ggctgcgtggtcctgccgggtcttgatcctgatctggacgaccgcgtctgggaccagatc
gacgaagaaaacgaacaacacccccagcgcgccctgaaacgcctgttggaacgccacggc
atccaccgtcacgccgtgcgtccatggttccagccgccagtcccgccccagacggagcag
cgcggtctggcccgccagcgcctgctgaacgaagccctgcgccccgccgatgcgaccgga
gactggcgcgaagccatccgcgacatccgcgcccgcgccgtggaggcgggccgcgccgcc
gaccccatcgccgagggactgcagggcctgtcggtcctgaacctgcggcatgacgaagag
accgccgccgccatcgccctgatgatgcgcgagacgctggagacgcccggcaagacctgc
gccctggtcacgccggatcagggtctggggcgccgcgtcgctgcgcgtctggaacgctgg
ggcgtggtgcctgacgcctcggccggtcagccgctgaaccggatgcctgcgggcgtgctg
gtcgaactgtgcgtgcgctggatcgccgccccgaccgatccgcaggtgctgctgggcctg
ctgaagcatccgctggtccagttggaccttggagaaatcgacgccgcccgcgccgtcgtg
gccttcgaggacatggccctgcgcggcccgcgccacgccagtttcgcgcggctgaagagg
aagctggaccacgccctgtcgccagaccgcgacggcgccccgccgtctgagggccgcctg
aaacgccatgcccaggcgcgcgccctgggcgaccatctggagggcctgatcacgacggcc
cgcgcgtccttcagccccgacgcaccactggacgccgccgcccgcgccctgaccgtgctg
atcgaggcgctggcgggtcagaacgcctgggccgggccggatggcgaatgcgccgccggt
ctgttgtcgaacctgatcaccggcggggcctcgctgggcgtcgtctcgaccagtgatctg
gtggaactgatcaaggggttgctggccgacgccgtggtgcgcaccggcggggcgacccat
ccgtcgctgcgcatcctgggcgccatcgaggcgcgtctggtgcgggccgaccggatgatc
ctggccgggctggaggaaggcgtctggccgcagggcgcgccggtcgatcccttcctgtcg
cgccccatgcgaaaggcgctgggcctgcccccgcccgagcgccgcatcggccagagcgcg
caggatttcgttcaggccgcctgcgccgacgaggccatattgatccacaccgaacggcgc
ggggggcaacccgccgtccgctctcgctggctgtggcggctggacatgctgacgcgcggc
gcgaacatggctgagacgccggtcgccgtttccgcccccgcccatgtcgccgactggatc
cgcgcgctggatgcgcctttgcgcgacacgcccgactatgcacgccgccccgccccgacc
ccgccggtggaccgccgtccgcgcaacctgcccgtcacggggatcgagcgctgggtgcgc
gacccctacgccgtctatgcccagcgcattctggggctgaaggtgctggaccggcccggc
gcctcggccgaggccatggcgcgcggcaacgccatccacgaggccatcgaacagatggtc
cgcgtctggcccgatgtcctgcccgaagattgcgccgaccagatcgccgacttcatcatg
accgccatgaccgacgccgggttcgaggatgcggccctggcgcgcgaacgcccgctggcc
cggaacgccgccctgtggctggagcggttcgagcgggaacggcgcgcgcgcggggcgacc
ctgctgatcgaacagtcgggcgccgtcgtctttgacgcccccgcaggccccttcacggtc
accgcccgcgccgaccggatcgaactggatgcgaacggggcggcggttctggacttcaag
accggccagacgcccagccagaaacaggtggtgcaggggttcgcgccgcagttgaccctg
accgccgccatcctggctgagggcgggttcgacgcgcccccgaccgaggcgaccgaactg
ctgtacgtcaaggtcaccggccgccgcgacccgggcaaggtggacgacgtctcacgtcag
gggcgcggcaacacccagaccgcagcccagatggccgcgcgcgaattggaccggctgaag
ctgggcgtcgccgcctttgatgacgaggctacgccctacacctcatgggtggcgccgcag
ttcatgggcaatttcggcggcaactacgaccatctggcgcgcgtctgggaatggcacgtc
gtcggcggcgaggacgaggcgcccgaatga
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integrated database retrieval system
