Brevundimonas nasdae: KWG56_16230
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Entry
KWG56_16230 CDS
T07529
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bnd
Brevundimonas nasdae
Brite
KEGG Orthology (KO) [BR:
bnd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bnd03016
]
KWG56_16230 (truB)
Enzymes [BR:
bnd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KWG56_16230 (truB)
Transfer RNA biogenesis [BR:
bnd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KWG56_16230 (truB)
Prokaryotic type
KWG56_16230 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QYC10087
LinkDB
All DBs
Position
complement(3324619..3325548)
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AA seq
309 aa
AA seq
DB search
MGRKKKGDIVDGWVCLDKPFEMGSTEAVSRIRRLFNAQKAGHAGTLDPLASGILPIALGE
ATKTVPMMMEAQKVYRFTINWGVSTDSVDREGEIIGRSDVRPSVDQVKAALPGFVGEIDQ
TPPRFSAIKVDGARAYDLARDGVEFELQARRVTIHSAEVTDAPDADHVEITIRTGKGVYV
RSLARDLAAVLGAEGHVSALRRERVGPFSTENAVTLDSLEEMVHRSAASEGLLPVATALD
DIPELAVTDQDAFSLRQGRPIVLLPRQVETLKDRLRDGSRTVSAFQGQTLVALCQLRAGR
LEPDRVFNL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtaagaagaagggcgacatcgtcgacggctgggtctgcctggacaagccgttc
gagatgggatcgacggaggccgtcagccgcatccgccgcctgttcaacgcccagaaagcc
ggtcacgccggcaccctggacccgctggccagcggcatcctgcccattgcgctcggtgag
gcgaccaagactgtgcctatgatgatggaggcgcagaaggtctatcgcttcaccatcaac
tggggcgtctcgaccgacagcgtggatcgtgaaggcgagatcatcggccgttccgacgtg
cgcccgagcgtggaccaggtgaaggccgccctgcccggcttcgtgggcgaaatcgaccag
acgccgccccgtttctcggccatcaaggtggacggcgcgcgcgcctatgacctggctcgc
gacggcgtggagttcgaactccaggcccggcgcgtgaccatccattccgccgaggtcacc
gacgccccggacgccgatcacgtcgaaatcaccatccgcaccggcaagggcgtctatgtg
cgttcgctggcccgcgatctggcggcggtgctgggggcagagggccacgtcagcgcattg
cgccgcgagcgggtcgggccgttcagcacggaaaacgccgtcactctggattctctggag
gaaatggtgcataggagcgccgcctcggaaggcttgcttcccgttgcgaccgccctggac
gacatcccggagctggccgtgacggatcaagacgccttctcgcttcggcagggacgcccg
atcgttctgctcccccgtcaggtggaaaccctcaaggatcgtcttcgcgacggttcgcgc
acggtttcagcctttcagggccagaccctcgtcgcactctgtcagttgcgggccggccgg
ttagaacccgaccgcgttttcaacctctag
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