Brevundimonas naejangsanensis: DA69_05005
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Entry
DA69_05005 CDS
T04375
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
bne
Brevundimonas naejangsanensis
Brite
KEGG Orthology (KO) [BR:
bne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bne03019
]
DA69_05005
Enzymes [BR:
bne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
DA69_05005
Messenger RNA biogenesis [BR:
bne03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
DA69_05005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
WHD_HA2
AAA_30
ResIII
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ANF54155
UniProt:
A0A172Y509
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All DBs
Position
1052010..1054445
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AA seq
811 aa
AA seq
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MLPIHAVLEPLKAALAQTSAVVLAAPPGAGKTTVVPLALLDQPWLAGGKILVLEPRRLAA
RAAADRMAANLGQKAGGTVGYRTRLQSRIGPDTRIEVVTEGVFTRMILDDPGLEGVGAVL
FDEFHERSLDADLGLALARDSQSVLRDDLRLLVMSATLDIAGVSRLLDGAPVIEAEGRMF
PVETRYLGRNPVERFEEAMAKAVVQALHEQTGSILAFLPGQGEIHRTVQRLNERLRDPSV
DVVALYGALDKAEQDRAIEPAAPGRRKVVLATSVAETSLTIEGVRVVIDGGLSRVPRFEP
SSGLTRLATVKVSRSSAEQRRGRAGRVEPGVCYRLWDEEQTRGLVAHQRPEIQEADLTAF
ALDLARWGAKSVEGLALLDPPPVGAMAEARRVLARLGALDAKGDLTPHGRRLTRIPLAPR
LAHMVAVASDQGDALGGARIAAVLSEPGLGGNGVDLHERLKGLERDRSPRGRDAMKLAER
WARAAGGGRDGEPDAGLLLAEAFPERVARAKGKPGEVLLASGRGAFIEPTDHLAREPWLA
VAELGGGDARDRIRLAAALDAATLEADLAHLIEVEDRLAREPSGKPVIRRIRRIGALVLD
EKVVGAPDRATMTAALKSEIEAGGLGALKWGEQAGALRARLAFMRELDGAWPDVSDEGLL
AAREDWLWPLLDGARSLADISDGKLAEALRGLIPWDLQRKLDELAPTRLTTPLGSAGIDY
AAEGGPRVEIRVQELFGVKAHPMVGGGRVPLTLSLLSPARRPVQVTKDLPGFWAGSWAAV
RSEMRGRYPRHPWPEDPANAAATSRAKPRGT
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgttgccgattcacgccgttctggagccgctgaaggccgccctggcccagacctctgcg
gtcgtcctggcggccccgccgggcgcgggcaagaccacggtcgtgcccttggccctgctg
gatcagccatggctggcgggcggcaagattttagtcctggagccgcgacgactagccgcg
cgcgccgccgctgatcgcatggccgctaatcttggccaaaaggctggcggaaccgtcggt
tatcgcacgcgtctgcagagccggatcggtccggacacccgaatcgaggtcgtgaccgag
ggcgtcttcacgcggatgattctcgacgacccgggcctggagggcgtcggcgccgtcctg
ttcgacgaattccacgagcgcagtctggacgccgatctgggtctggcgctggcgcgcgac
agtcagtcggtgctgcgcgacgatctgcgtctgctggtcatgtcggcgacgctcgacatc
gcgggggtgtcgcgcctgctcgacggcgcgccagtgatcgaggccgagggacggatgttc
ccggtcgagacccgctatctgggccgcaacccggtcgaacggttcgaggaggccatggcc
aaggccgtggttcaggccctgcacgagcagaccggttcgatcctggccttcctgccgggg
cagggcgagattcaccgcaccgtccagcgcctgaacgagcggctgcgtgatccgtcggtc
gatgtcgtcgccctctatggcgcgctcgacaaggccgagcaggaccgcgccatcgagccc
gccgcgcctggccgccgcaaggtggttctggcgacctccgtggccgagaccagcctgacc
atcgagggggtgcgcgtggtgatcgacggcggcctgtcgcgcgtgccccgcttcgaaccg
tccagcggcctgacccggctggcgacggtcaaggtcagccgatcctcggccgagcagcgg
cggggccgcgcgggccgggtcgaaccgggcgtctgctatcgcctgtgggacgaggaacag
acgcgcggcctggtcgcccatcagcggccggaaattcaggaggcggatctgaccgccttc
gcgctcgatctggcgcgttggggggcgaagtcggtcgaggggctggccctgctggacccg
ccgcccgttggcgccatggccgaggcgcgcagagtgctggcccgtctgggcgcgctggac
gccaagggcgacctgacgccgcacgggcgacggctgacccgcatccccttggcgccgcgt
ctggcccacatggtcgctgtcgcctcagatcagggcgatgccctgggcggggcgaggatc
gcggcggtgctcagcgagccgggcctcggcggaaacggcgtcgatctgcacgaacgcctc
aagggactggagcgggaccgttcgccgcgcggccgcgacgcgatgaagctggctgagcgc
tgggcgcgggcggcgggcggcggccgggacggcgagccggacgccggcctgctgctggcc
gaggccttccccgaacgcgtcgcgcgcgccaagggcaagccgggcgaggtgctgctggcc
tccgggcgcggcgccttcatcgagccgacggatcatctggcgcgcgaaccgtggttggcg
gtggcggaactgggcggcggagacgctcgcgaccgcatccgtctggcggcggcgctggac
gccgcgacgctggaagccgatctggcgcatctgatcgaggtcgaggaccggctggcgcgc
gagccttccggcaagccggtgatccgccgcatccggcgcatcggcgcgttggtgctggac
gagaaagtggtcggcgcgccggatcgggcgaccatgaccgcggcgctgaagtcggaaatc
gaagcgggcggcctcggcgccttgaagtggggcgagcaggcgggagcgctgcgggcgcgg
ctggctttcatgcgcgagctggacggcgcctggcccgacgtttcggatgaggggctgctg
gcggcgcgcgaggactggctctggcctctgctggacggtgcgcgatcgctggccgacatc
agcgacggcaagctggctgaagccctgcgcggactgatcccctgggatttgcagcgcaag
ctggatgaactggcgccgacgcgcctgaccacgccgctgggcagcgcgggcatcgactat
gccgccgagggcggaccgcgtgtcgaaatccgggtgcaggaactgttcggcgtaaaggcg
cacccgatggtcggcgggggccgtgtgcccctgacgctcagcctgctgtcgcccgcgcgg
cggccggtgcaggtgaccaaagacctgccgggtttctgggcagggtcatgggcggcggtg
cgcagcgagatgcgcggccgctatccgcgccacccgtggccggaagatccggccaatgcg
gcggcgaccagccgggccaagccgcgcggaacctga
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