Brevundimonas naejangsanensis: DA69_05175
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Entry
DA69_05175 CDS
T04375
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bne
Brevundimonas naejangsanensis
Brite
KEGG Orthology (KO) [BR:
bne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bne03032
]
DA69_05175
03400 DNA repair and recombination proteins [BR:
bne03400
]
DA69_05175
Enzymes [BR:
bne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DA69_05175
DNA replication proteins [BR:
bne03032
]
Prokaryotic type
DNA Topoisomerases
DA69_05175
DNA repair and recombination proteins [BR:
bne03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DA69_05175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ANF54186
UniProt:
A0A172Y4W1
LinkDB
All DBs
Position
complement(1087360..1089996)
Genome browser
AA seq
878 aa
AA seq
DB search
MNLVIVESPAKAKTINKYLGSDYKVLASYGHVRDLPSKDGSVLPDDDFAMHWEVDAKASK
RLSEIAEAAKAADRVILATDPDREGEAISWHVLEILNKKKALKDKDVQRVTFNAITKSAV
LEAMANPRQLDMELVDAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVALRIVVDR
EMEIERFKAQEYWSVEADLIADSPPFTARLVKHEGKRVQRLDIVSEAMAMAAREAVHSGD
FTIKSVEKKPAKRSPAPPFTTSTLQQEAARKLGFTAQRTMQAAQKLYEGVDDTGGLITYM
RTDGVYVTPEGIAQAREAIGQRFGPAYVPAEPRYYKTKAKNAQEAHEAIRPTNILRSPDT
LRLDSDLQRLYELIWKRMIASQMESARLDRTTVEIETPDGQTGLRATGQVVAFDGFIAAY
EEGRDEKQKGAEEDEDEGGRLPALKEGAKAKVEAIRTDQHFTEPPPRFSEATLVKKLEEL
GIGRPSTYASILTTLRDREYVRMDKNRFFPEDKGRLVTAFLEQFFAKWVEYDFTAALETQ
LDEVSAGDLDWKTLLRRFWQDFHAATQAAGELRTTAILDHLNDALGPHIFPDKGDGADPR
ECPVCHEGQLSLKTSRFGAFIGCSRYPECKYTRPVASPDGAEGGAESGDRELGVDPATGQ
PVHLKIGRFGPYVETTPPDAEKPKRSSLPKGWTPASMDLEKALRLLSLPRDVGPHPEDGK
MITASLGRYGPFVAHAGTYANVADIEEVFDVGLNRAVALLAEKRAGRAGRASAAAPLKEL
GAHPETGEAVQVMAGRYGPYVKSGKINATLPKGTAPEDMTMEAALPLLAAKAGAAPKKKA
PAKKAAAKKPAAKKEPAAKKPAAKKAPAKKAAKAADAE
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcgtcatcgtcgagagccccgccaaggccaagaccatcaataaatacctgggc
tcggactataaggttctggcttcctacggccacgtccgcgacctgccgtccaaggacggc
tcggtgctgcccgacgatgacttcgccatgcactgggaggtcgacgccaaggcttccaag
cgcctgtccgagatcgccgaggccgccaaggccgccgaccgcgtcatcctggccaccgac
cccgaccgcgagggagaggcgatcagctggcacgttctggagatcctgaacaagaagaag
gcgctgaaggacaaggacgtccagcgcgtcaccttcaacgccatcaccaagtccgccgtg
ctggaggccatggccaacccgcgccagctggatatggagctggtggacgcctatctggcg
cgccgggcgctggactatctggtgggcttcaacctgtcgccggtgctgtggcgcaagctg
ccgggcgcccgttcggcgggacgggtgcagtcggtcgccctgcgcatcgtcgtcgaccgc
gagatggagatcgagcggtttaaggctcaggaatactggtcggtcgaggccgacctgatc
gctgacagcccgcccttcaccgcccgcctggtcaagcatgaaggcaagcgggtccagcgc
ctggacatcgtgtccgaggccatggccatggccgcgcgcgaggccgtccatagcggcgac
ttcactatcaagtcggtcgagaagaagccggccaagcggtcccccgccccgcccttcacc
acctcgaccctgcaacaggaagcggcacgcaagctgggcttcaccgcccagcgcaccatg
caggcggcgcagaagctgtacgagggcgtcgacgacaccggcggcctgatcacctacatg
cgtaccgacggcgtctatgtgacgcctgaaggcattgctcaagcgcgcgaggccatcggc
cagcgtttcggcccggcctacgtcccggccgagccgcgctactacaagaccaaggccaag
aacgcccaggaagcgcacgaagccatccgtccgaccaacatcctgcgcagccccgacacc
ctccggctcgatagcgacctgcagcggctctacgagttgatctggaagcgtatgatcgcc
tcgcagatggaatcggcgcgtctggaccgcaccacggtcgagatcgagacgcccgacggc
cagaccggcctgcgcgccaccggccaagtcgtggccttcgacggcttcatcgccgcctat
gaggaaggccgggacgagaagcagaaaggcgccgaggaagacgaggacgaaggcggccgc
ctgcccgcgctgaaggaaggcgccaaggccaaggtcgaggcgatccgcaccgaccagcat
ttcaccgagccgccgccgcgcttctcggaagccaccctggtcaagaagctggaagagttg
ggcatcggccgtccgtccacctacgcctccatcctgacgaccctgcgcgaccgcgaatac
gtccgcatggacaagaaccgcttcttcccagaggacaaggggcggctggtcacggccttc
ctggagcagttcttcgccaaatgggtcgaatacgacttcaccgccgcgctggagacccag
ctggacgaggtgtcggcgggcgatctggactggaagaccctgctgcgccgcttctggcaa
gacttccacgccgcgacccaggctgcgggcgagttgcgcaccacggctatcctggatcac
ctgaacgacgccctgggcccgcacatcttccccgacaagggcgacggggcggacccgcgc
gaatgcccggtttgtcatgaaggccagctgagcctgaagaccagccgtttcggcgctttc
atcggctgctcgcgctatccggagtgcaaatacacccgcccggtggcctcgcccgacggg
gccgagggcggcgcggagagcggcgaccgcgaactgggcgtcgatccggcgaccggccag
ccggtgcatctgaagatcggtcggttcggcccctatgtcgaaaccacgccgccggacgcg
gaaaagcccaaacgctcgtccctgcccaagggctggaccccggcgtcgatggatcttgag
aaggcgctgcgcctgctcagcctgccgcgcgacgtgggcccgcaccccgaagacggcaag
atgatcaccgccagcctgggccgctacgggccgttcgtggcgcacgcgggcacctacgcc
aatgtcgccgacatcgaagaggtgttcgacgtcggcctgaaccgcgccgtggccctgttg
gctgaaaagcgtgcgggtcgtgcgggccgcgcctcggccgccgcgccgctgaaggaactg
ggcgcccacccggaaacgggcgaggccgtgcaggtcatggccggccgctacggcccctac
gtcaagtcaggcaagatcaacgccaccctgcccaagggcacggcgcccgaagacatgacg
atggaggccgccctgcccttgctggccgccaaggccggcgccgcgccgaaaaagaaggcg
cccgccaagaaggcggctgcgaagaagcctgcggccaagaaggagcccgcagccaagaag
ccggccgcgaagaaggccccggccaagaaggcggctaaggccgcagacgcggaatag
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