Brevundimonas naejangsanensis: DA69_07615
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Entry
DA69_07615 CDS
T04375
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bne
Brevundimonas naejangsanensis
Pathway
bne03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bne00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DA69_07615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bne03021
]
DA69_07615
03400 DNA repair and recombination proteins [BR:
bne03400
]
DA69_07615
Enzymes [BR:
bne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DA69_07615
Transcription machinery [BR:
bne03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DA69_07615
DNA repair and recombination proteins [BR:
bne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DA69_07615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
Bap31_Bap29_C
Motif
Other DBs
NCBI-ProteinID:
ANF54622
UniProt:
A0A172Y640
LinkDB
All DBs
Position
complement(1612269..1616384)
Genome browser
AA seq
1371 aa
AA seq
DB search
MAKSTDGLALGKIAAATSFTGKKRIRYSFGRIPEAVQMPNLIEVQRASYEQFLQRESRPG
LRNDEGIEAVFKSVFPIKDFNERAVLEYVSYEFEDPKYDVEECIQRDMTYAAPLKVKLRL
IVFETEEETGARSVKDIKEQDVYMGDIPLMTDKGTFIVNGTERVIVSQMHRSPGVFFDHD
KGKTHSSGKLLFAARVIPYRGSWLDFEFDAKDIVYVRIDRRRKLPASTFLYALGMDGEEI
LKTFYETVPYEKRGEGWVTPYKPERWRGVKPEFDLVDADTGEVVAPAGQKISARAAKKLA
DGGLKSLSLAADALLTKYLASDAVNYQTGEIYAEAGDELDAAAIELLEANGFTTIDVLDI
DHVTVGAYMRNTLRVDKNTGREDALFDVYRVMRPGEPPTPEAAEAMFNSLFFDAERYDLS
AVGRVKMNMRLETPEVSDEIRVLQKDDVLKVLQILVGLKDGRGEIDDIDNLGNRRVRSVG
ELLENQYRVGLLRMERAIKERMSSVDIDTVMPHDLINAKPAAAAVREFFGSSQLSQFMDQ
TNPLSEITHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLAT
HARVNKYGFIESPYRRVVDGKATDEVVYISAMEEAKHVIAQANIELKDGEIVEELVPGRI
NGDSQLLTKEAVDMMDVSPKQVVSVAAALIPFLENDDANRALMGANMQRQAVPLVKSDAP
LVGTGMEAVVAVDSGAVVVARREGVVEQIDGTRIVVRATGDVEAGRSGVDIYRLSKFQRS
NQSTCINQRPIVRVGDAVKAGDVIADGPSTDLGELALGRNALVAFMPWNGYNFEDSILIS
ERIVRDDIFTSIHLEEFEVMARDTKLGPEEITRDIPNVGEEALRNLDEAGIVAIGAEVQP
GDILVGKVTPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGVAGTIVDVRVFNRHGI
DKDERAMAIERAEIERLGKDRDDELKILERNVYGRVKPLLLGKTAVSGPKGMGRGEVTEE
KLAEVSKGLWWQVALDDEKAMGELEAMKKQFEDARKALDRRFEDKVEKLQRGDEMPPGVM
KMVKVFVAVKRKLQPGDKMAGRHGNKGVISKILPIEDMPYLEDGTHVDVVLNPLGVPSRM
NIGQIFETHLGWAAAGLGKQISGLLEAWQHGGQKQALIERLTEVYGADTPLPDDEEDLIE
LAKNLSKGVPFATPVFDGARISDIEDLLESAGLDRSGQSILYDGQTGEQFKRPVTVGYIY
MLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEML
TVKSDDVAGRTKVYEAIVRGDDSFEAGIPESFNVLVKEMRSLGLNVELENS
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atggccaagtccaccgacggtctcgccttgggtaagatcgctgccgccacgtcgtttacc
ggcaagaagcgcattcgctacagcttcgggcgcattcccgaagccgtgcagatgccgaac
ctgatcgaggttcagcgcgcttcgtacgagcagttcctgcagcgcgagtcgcgtccgggc
ctgcgcaacgacgagggcatcgaggcggtcttcaagtcggtgttcccgatcaaggacttc
aacgagcgcgccgtcctggaatacgtctcctacgagttcgaggacccgaagtacgacgtt
gaggaatgcatccagcgcgacatgacctatgccgcgccgctgaaggtcaagctgcgcctg
atcgtgttcgagaccgaggaagaaacgggcgcccgttcggtcaaggatatcaaggagcag
gacgtctacatgggcgacatcccgctcatgacggacaagggcaccttcatcgtcaacggc
accgagcgcgtgatcgtctcgcagatgcaccgctcgccgggcgtcttcttcgaccacgac
aagggcaagacccactcgtcgggcaagctgctgttcgccgcccgcgtgatcccgtatcgc
ggctcgtggctggacttcgagttcgacgccaaggacatcgtctacgtccgtatcgaccgt
cgtcgtaagctgccggcctcgaccttcctctatgccctgggcatggacggggaagagatc
ctcaagaccttctacgagacggttccgtacgagaagcgcggcgaaggctgggtcacgccc
tacaagccggaacgctggcgcggcgtgaagccggagttcgacctggtcgacgccgacacc
ggcgaagtggtcgccccggccggtcagaagatcagcgcccgcgccgccaagaagctggcc
gacggcggtctgaagtcgctgtcgctggcggctgacgccctgctgaccaagtatctggcc
tccgacgccgtcaactatcagaccggcgaaatctacgccgaggcgggcgacgagctggac
gccgcggcgatcgagttgctggaagccaacggcttcaccaccatcgacgtgctggacatc
gaccacgtcacggtcggcgcctacatgcgcaacaccctgcgcgtggacaagaacacgggc
cgcgaggacgcgctgttcgacgtctatcgcgtcatgcgcccgggcgagccgccgacgccg
gaagcggccgaggccatgttcaactccctgttcttcgacgccgagcgctacgacctgtcg
gccgtgggccgcgtgaagatgaacatgcgtctggaaacccctgaggtttctgacgaaatc
cgcgtcctgcagaaggacgacgtgctgaaggtgctgcagatcctggtcggcctgaaggac
ggccgcggtgagatcgacgacatcgacaacctgggcaaccgccgggtccgttcggtcggc
gaactgctggaaaaccagtaccgcgtcggcctgctgcgcatggagcgcgccatcaaggag
cgcatgtcctcggtcgatatcgacacggtcatgccgcacgacctgatcaacgccaaaccg
gccgccgccgcggtgcgtgaattcttcggctcgtcgcagctgtcgcagttcatggaccag
acgaacccgctgtcggaaatcacccacaagcgtcgtctgtcggcgcttggcccgggcggt
ctgacgcgtgagcgcgcgggcttcgaagtccgcgacgttcacccgacgcactatggccgc
atctgcccgatcgaaacgccggaaggcccgaacatcggtctgatcaactcgctggccacc
cacgcccgcgtgaacaagtacggcttcatcgaaagcccgtaccgtcgcgtggtcgacggc
aaggcgacggacgaggtggtctacatctcggccatggaagaggcgaagcacgtcatcgcc
caggccaacatcgagctgaaggacggcgagatcgtcgaggagctggtgccgggccggatc
aacggcgattcccagctgttgaccaaggaagcggtcgacatgatggacgtgtcgcccaag
caggtcgtttcggtcgccgccgccctgatcccgttcctggaaaacgatgacgccaaccgc
gcgctgatgggcgccaacatgcagcgtcaggccgtgccgctggtgaagtcggacgcgccg
ctggtcggcaccggcatggaagccgtcgtggccgtggattccggcgctgtcgtggtcgcc
cgtcgtgaaggcgtggtcgagcagatcgacggcacccgtatcgtcgtgcgcgccacgggc
gatgtggaagccggccgctcgggcgtcgacatctatcgcctgtcgaagttccagcgttcg
aaccagtcgacctgcatcaaccagcgcccgatcgtgcgcgtgggcgatgcggtgaaggcc
ggcgacgtcatcgccgacggcccgtcgacggacctgggcgaactggctctgggccgcaac
gccctggtcgccttcatgccctggaacggctacaacttcgaagactcgatcctgatctcc
gaacggatcgtgcgcgacgacatcttcacctcgatccacctggaagagttcgaggtcatg
gcccgcgacaccaagctgggcccggaagagatcacccgcgacattccgaacgtcggcgag
gaagccctgcgcaacctcgacgaggcgggcatcgtggccatcggcgccgaagtccagccg
ggcgacatcctggtcggcaaggtgacgccgaagggcgagagcccgatgactccggaagag
aagctgctgcgcgccatcttcggcgagaaggcttcggacgtgcgcgacacctcgctgcgc
ctgccgcccggcgtcgccggcaccatcgtcgacgtgcgcgtgttcaaccgccacggcatc
gacaaggacgagcgcgccatggcgatcgagcgcgccgagatcgagcgtctgggcaaggac
cgcgacgacgagctcaagatccttgagcgcaacgtctacggccgcgtgaagccgctgcta
ctcggcaagaccgccgtgtccggcccgaagggcatgggccgcggcgaggtcaccgaagag
aagctggccgaagtgtccaagggcctgtggtggcaggtcgccctcgacgacgagaaggcg
atgggcgagctggaggccatgaagaagcagttcgaggacgcccgtaaggccctcgaccgc
cgcttcgaagacaaggtcgagaagctgcaacgcggcgacgagatgccgcctggcgtcatg
aagatggtcaaggtcttcgtggccgtgaagcgcaagctgcagccgggcgacaagatggcc
ggccgtcacgggaacaagggcgtcatctccaagatcctgccgatcgaggacatgccgtac
ctggaagacggcacccacgtcgatgtggtgctgaacccgctgggcgtgccgtcgcgcatg
aacatcggtcagatcttcgagacccacctgggttgggccgccgccggtctgggcaagcag
atctccggtctgctggaagcctggcagcacggcggtcagaagcaggctctgatcgagcgt
ctgaccgaggtctatggcgcggacaccccgctgccggacgacgaggaagacctgatcgaa
ctggcgaagaatctgtctaagggcgtgcccttcgcgaccccggtcttcgacggcgcgcgc
atctcggacatcgaggacctgctggaatcggcgggcctggaccgttcgggccagtcgatc
ctgtacgacggtcagaccggcgagcagttcaagcgtccggtcacggtcggctacatctac
atgctgaagctgcaccacctggtcgacgacaagatccacgcccgttcgatcggcccgtac
tcgctcgtcacccagcagccgctgggcggtaaggcgcagttcggcggtcagcgcttcggg
gaaatggaggtctgggctctggaagcttacggcgccgcctacaccctgcaggaaatgctg
acggtgaagtcggacgacgtggccggccggaccaaggtctacgaggccatcgtccgcggc
gacgacagcttcgaggccggcatccccgagtcgttcaacgtgctcgtgaaggaaatgcgc
tcgctgggcctgaacgtggagctggaaaacagctga
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