Brevundimonas naejangsanensis: DA69_12285
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Entry
DA69_12285 CDS
T04375
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bne
Brevundimonas naejangsanensis
Pathway
bne03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bne00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DA69_12285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bne03021
]
DA69_12285
03019 Messenger RNA biogenesis [BR:
bne03019
]
DA69_12285
Transcription machinery [BR:
bne03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DA69_12285
Messenger RNA biogenesis [BR:
bne03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DA69_12285
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
ATPase_2
OB_RNB
NACHT
AAA
S1CSD-TOTE-2
AAA_25
AAA_14
Motif
Other DBs
NCBI-ProteinID:
ANF55446
UniProt:
A0A172Y8G5
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All DBs
Position
complement(2559028..2560524)
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AA seq
498 aa
AA seq
DB search
MTDTPETPDTEVAENATETPVERPRRTLSLGGSRAAAPVEEAEPEVPVQPISDDDDHGVD
TTAEDDDEDDDGEPIVPNGRITLQELNEKTPEDLVAFAEGLDIENAGNLRKQDLLFAILK
TLADEEVEIIASGVLEILPDGFGFLRSPDANYLPGPDDVYVSPSQIRRFGLRSGDTVHGA
VRGPREGERYFALLKVDTINFEDPEMVKTKVLFDNLTPLYPEERLNMEIQDPTLKDRSGR
VIDIVAPLGKGQRCLIVAPPRVGKTMMLQNIAKSIERNHPEVFLIVLLIDERPEEVTDMQ
RTVKGEVVASTFDEPATRHVAVAEMVIEKAKRLVEHKKDVVILLDSITRLGRAYNATVPS
SGKVLTGGVDANALQRPKRFFGAARNVEQGGSLTIIATALIDTGSRMDEVIFEEFKGTGN
SEIVLDRKVADKRIFPAIDVLKSGTRKEDLITPKDQLAKTYVLRRILNPMGPQDAIEFLL
DKLRQSKNNGDFFQSMNT
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatacgcctgaaactccggacaccgaagtcgctgaaaatgcaacggaaacgccg
gttgagcggccgcgtcgcacccttagcctgggcggcagccgcgcggcggcgccggtcgag
gaggccgagcccgaagtcccggttcagcctatctctgacgacgacgaccacggcgtcgac
accacggctgaagacgacgatgaggacgacgacggcgagcccatcgtccccaacggccgc
atcacgcttcaggaactgaacgagaagacaccggaagacctggtcgccttcgccgagggc
ctggacatcgagaacgccggcaacctgcgcaagcaggacctgctgttcgccatcctgaag
accctggccgacgaagaggtcgagatcatcgcctcgggcgtgctggagatcctgccggac
ggcttcggcttcctgcgcagccccgacgccaactacctgccgggtccggacgacgtctat
gtctcgccgtcgcagatccgccgcttcggcctacgttcgggcgacacggtgcacggcgcc
gtgcgcggcccgcgcgagggcgagcgctatttcgccctgctcaaggtcgatacgatcaac
ttcgaagatccggagatggtcaagaccaaggtcctgttcgacaacctgaccccgctctat
cccgaagagcggctcaacatggagatccaggacccgacgctgaaggatcgctcgggccgg
gtcatcgacatcgtcgcgcccctgggcaaggggcaacgctgcctgatcgtcgccccgccg
cgcgtcggcaagacgatgatgctgcagaacatcgccaagtcgatcgagcgcaaccacccg
gaagtctttctgatcgtcctgttgatcgacgaacgccccgaagaagtcaccgacatgcag
cgcacggtgaagggggaggtcgtcgcctcgaccttcgacgagccggccacccgccacgtc
gccgtggccgagatggtgatcgaaaaggccaagcgccttgtcgagcataagaaggacgtg
gtgatcctgctggactccatcacccgcctgggccgcgcctacaacgccacggttccctcg
tcgggcaaggtgctgaccggcggcgtcgacgccaacgccctgcagcggcccaaacgcttc
ttcggcgccgcgcgcaacgtggagcagggcgggtcgctgaccatcatcgccacggccctg
atcgacacgggcagccgcatggacgaggtgatcttcgaagagttcaagggcaccggcaac
tcggaaatcgtgctggaccgcaaggtcgccgacaagcgcatcttcccggccatcgacgtg
ctcaagtcgggcacccgcaaggaagacctcatcacgccgaaggaccagctggccaagacc
tatgtcctgcgccgcatcctcaacccgatgggtccgcaggacgcgatcgagttcctgctc
gacaagctgcgccagtccaagaacaacggcgacttcttccagtccatgaacacctga
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