Brenneria nigrifluens: EH206_00825
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Entry
EH206_00825 CDS
T06070
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bng
Brenneria nigrifluens
Pathway
bng03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EH206_00825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bng03400
]
EH206_00825
Enzymes [BR:
bng01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
EH206_00825
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EH206_00825
DNA repair and recombination proteins [BR:
bng03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EH206_00825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Ribosomal_S13
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
QCR02889
LinkDB
All DBs
Position
186718..187527
Genome browser
AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGISPYLVGHTILYAEVRNARLRWPVSSEILSLSDRVVLGVHRRAKYLL
IELTGGWIIVHLGMSGSLRILPEYIEPGKHDHVDLVMDSGKVLRYTDPRRFGAWLWTNTL
QESTVLAHLGPEPLSDDFSADYLHQKSRGKKTRVKLWIMDNKVVVGVGNIYASESLFAAG
IDPDRAAGSLSEAETARLAETIKQVLQRSIEQGGTTLRDFLQSDGKPGYFAQELQVYGRT
GEPCRVCGAPIQIAKHGQRSTFFCRVCQR
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattgcctgaggttgaaaccagtcggcgcggaatttcgccctaccttgttggc
cataccatcctctatgccgaagtgcgcaacgcccgtttgcgctggccggtttccagcgag
attttatccctcagcgatcgggtcgttctgggggtgcatcggcgcgccaaatatctgctg
attgaattaaccggcgggtggatcatcgttcatctgggcatgtccggcagtctgcgtatc
ctgccagagtacatcgaaccgggtaaacacgatcacgtggatttggtgatggatagcggc
aaagtgctgcgctataccgatccccgccgcttcggcgcctggctatggacaaacactctg
caggagagcacggtgctggcccatttggggccggaaccgctgagtgatgatttttccgct
gactatctgcaccagaaatcacgcggcaagaagacgcgggttaagttgtggattatggat
aataaagtggtggttggcgtggggaacatctatgccagcgaatccctgttcgcggcgggc
atcgacccggaccgagcggccggctcgctaagcgaggccgagacggcgcgactggcggaa
accatcaaacaggtgctgcagcgttccattgagcagggcgggacaacgctgcgtgatttt
ctgcaatcagacggcaagccgggatattttgcccaggagctgcaggtttacggccgtacc
ggcgagccttgccgggtctgcggcgcgccgatacaaatagctaaacacggtcagcgcagc
acgtttttctgtcgggtctgtcagcgatga
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