Brenneria nigrifluens: EH206_02105
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Entry
EH206_02105 CDS
T06070
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bng
Brenneria nigrifluens
Pathway
bng00040
Pentose and glucuronate interconversions
bng01100
Metabolic pathways
bng02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bng00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
EH206_02105
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EH206_02105
Enzymes [BR:
bng01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
EH206_02105
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
QCR03114
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All DBs
Position
complement(465683..466807)
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AA seq
374 aa
AA seq
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MKYLLPSAAAGLLFLACQHAMAADTGGYATTDGGNVSGAVNKTAGSMQDIVDIIAAARLD
SSGKKVSGGAYPVVITYNGNEDDLIKAAEADICGQWSKPARGVEIKEFTKGITILGSNGS
STNFGIWITKSSNVVVRNMRMGYMPGGAQDGDAIRIDDSPNVWIDHNEIFAKNHECEGTP
DGDTTFESAVDIKKGSTNVTVSYNYIHGVKKVGLSGSSNSDTGRNLTYHHNVYSDVNARL
PLQRGGQVHAYNNLYSGVTSSGLNVRQNGIALIESNWFENAKNPVTSRYDGSNFGTWDLR
NNNITKPADFTTYGITWDKDSKAYVNADSWTSTGTFPALPYSYSPVTAQCVKNKLANYAG
VGKNLAVLTASACQ
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacctactgccttcagccgccgccgggctgttatttcttgcctgccaacacgcg
atggcggccgataccggcggctatgccaccaccgacggcggcaacgtttccggagccgtc
aataaaacggccggttcaatgcaggacattgtcgatatcatcgcggccgcgcgtctggac
tcaagcggtaaaaaagtgtcaggcggcgcctaccccgtcgtcatcacctataacggcaat
gaagatgacttaatcaaggcggcggaagccgatatctgcggtcaatggagcaaaccggcg
cgcggcgtggagatcaaggagtttaccaaaggcattaccatcctcggcagcaatggttcc
tcaacgaacttcggtatctggatcaccaagtcgtccaacgtcgtggtgcgtaatatgcgc
atgggttatatgcccggaggcgcccaggatggcgatgcaatccgcatcgacgactcgccg
aacgtctggatcgaccataacgagatcttcgcgaaaaaccatgagtgcgagggcacgccg
gacggcgataccacctttgaatccgccgtggatatcaaaaaagggtcgaccaacgtcacc
gtatcctacaactacattcacggcgtcaaaaaggtcggcctaagcggttccagcaacagc
gataccggacgcaacctcacctatcaccacaacgtctacagcgacgtaaacgcccggctg
ccgctgcagcggggcggtcaggtgcatgcctacaacaacctctattccggcgtcaccagt
tcagggctgaacgttcgtcagaacggcatcgcattgatcgaaagcaactggtttgagaat
gcgaaaaacccggtgacatcccgttacgatggctcgaatttcggcacatgggatctgcgc
aacaacaacattaccaaacccgccgatttcaccacctacggcatcacctgggacaaggat
tccaaagcctacgtcaatgccgatagctggaccagcaccggcacattccccgcactcccc
tatagctactcgccggtaaccgcgcagtgcgtaaaaaataaactggcgaactatgccggc
gtcggcaagaaccttgccgtattgaccgcctcagcctgtcaatga
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