Brenneria nigrifluens: EH206_02350
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Entry
EH206_02350 CDS
T06070
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bng
Brenneria nigrifluens
Pathway
bng03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bng00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EH206_02350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bng03021
]
EH206_02350
03400 DNA repair and recombination proteins [BR:
bng03400
]
EH206_02350
Enzymes [BR:
bng01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EH206_02350
Transcription machinery [BR:
bng03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EH206_02350
DNA repair and recombination proteins [BR:
bng03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EH206_02350
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
QCR03159
UniProt:
A0A2U1UTY9
LinkDB
All DBs
Position
496956..497945
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKEEVILTLNKSGIGPVTAADIVHDGD
VEIVKPQHLICHLTDENAAISMRIKVQRGRGYVPASARIHTEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggttgatatcgagcaagtgagt
tcgacgcacgccaaggtgacccttgagccattagagcgtggctttggccatactcttggc
aacgcactgcgccgtattctgctttcatccatgccaggttgcgcggtgaccgaggttgag
attgatggtgtactgcatgagtacagcaccaaagaaggcgtacaggaagacatcctggaa
atcctgctcaacctgaaagggctggcggtgagagttcaaggcaaagaagaagttattctt
accctgaataaatctggcattggccctgtgactgcagccgacatcgtccatgacggcgat
gttgaaatcgtcaagccacagcacctgatctgccacctgaccgatgaaaacgccgctatc
agcatgcgtatcaaagttcagcgtggccgtggttatgtgccggcatctgcccgtattcat
acggaagaagatgagcgcccgatcggtcgcctgttagtcgatgcttgctacagccctgta
gagcgtattgcctacaatgttgaagcggcgcgcgtagaacagcgtaccgacctggacaag
ctggtcatcgaaatggaaaccaacggcacgatcgatcctgaagaggcgatccgccgtgcg
gccaccattctggctgaacaacttgaagcttttgttgacctgcgtgacgtgcgtcaaccg
gaagttaaagaagaaaaaccagagttcgatccgatcctgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgcctcaaggcagaagctatccactacatcggtgat
ctggtacagcgtaccgaggttgagctgttgaaaacgcctaacctgggtaaaaaatctctt
accgagattaaagacgtactggcttcccgtggcctgtctctgggcatgcgcctggaaaac
tggccaccggcaagcattgctgatgagtaa
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