Brenneria nigrifluens: EH206_11840
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Entry
EH206_11840 CDS
T06070
Name
(GenBank) oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
bng
Brenneria nigrifluens
Pathway
bng00040
Pentose and glucuronate interconversions
bng01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bng00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
EH206_11840
Enzymes [BR:
bng01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
EH206_11840
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase22
PD40
Motif
Other DBs
NCBI-ProteinID:
QCR04807
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Position
complement(2512775..2513941)
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AA seq
388 aa
AA seq
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MAKGNKFSLAFHTYQDSVTGTEVVRLTPPDVICHRNYFYQKCFTRDASKLLFGGAFDGPW
NYYLLDLKTRQATQLTEGEGDNTFGGFLSPDDEALYYVKNGRDLRRVDLQTLEEKRIYQV
PEDWVGYGTWVANSDCSKMVGIEISKEDWQPLTDWKKFQAFYFTNPCCRLIRIDLSSGKA
ATILQENRWLGHPIYRPGDDNTVAFCHEGPHDLVDARMWFINEDGGNMRKVKEHAPGESC
THEFWVPDGSALIYVSYHKGNSHRYICSVDPVTLENRRLTAMPPCSHLMSNFDGSLLVGD
GSDAPVDVQDDGGYKIENDPFLYVFNMRTGQRHRVAQHNTSWKVLQGDRQVTHPHPSFTP
DDKQILFTSDADGKPALYLARVPDAVRH
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaggcaacaagttctccctggcgtttcatacctatcaggattcagtaaccggt
accgaagttgtgcgtttaaccccgcccgacgtcatttgccaccgcaactacttttatcag
aaatgcttcacccgcgacgcaagcaagctgctgtttggcggcgcgtttgacggcccgtgg
aactattacctgctggatctgaaaacgcggcaggccacgcagttgaccgagggcgagggc
gacaatacctttggcggttttctgtctcccgatgacgaggcgctctattacgtgaaaaac
ggacgcgatctgaggcgcgtcgatctgcaaacgctggaagagaaaaggatttatcaggtt
cctgaagactgggtgggatacggtacctgggtggccaattccgactgtagcaaaatggtg
gggattgaaatcagcaaagaagattggcaaccattgacggactggaaaaaattccaggcg
ttttactttaccaatccgtgctgccgcctgattcgtattgatttgtccagcggtaaagcg
gcaaccatcctgcaggaaaaccgctggctgggccatccgatctaccgtcccggcgacgat
aacaccgttgccttctgccatgaaggtccgcacgatttggtcgatgcccggatgtggttt
attaatgaagacggcggcaatatgcgtaaagtgaaggagcatgcgccgggagagagctgc
acccatgagttctgggtgccggatggttcggcgctgatctatgtgtcttatcacaaaggc
aattcgcatcgttatatctgcagcgtcgatcccgtcacgctggaaaaccgccggctgacc
gcgatgccgccatgttcccacctgatgagcaactttgacggttcgctgctggtgggggat
ggttccgatgccccggttgacgtgcaggatgatggcggctacaagattgaaaatgatcct
ttcctgtatgtctttaacatgcggaccggtcagcggcatcgcgttgctcaacacaatacc
tcctggaaagtgttgcaaggcgatcgccaggtaacgcatccgcatccttcctttacgccg
gatgataaacagattctgtttacctccgacgccgatggcaaaccggcgctttatctggct
cgggttcctgacgccgtgcggcattaa
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