Brenneria nigrifluens: EH206_12885
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Entry
EH206_12885 CDS
T06070
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
bng
Brenneria nigrifluens
Pathway
bng03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
EH206_12885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bng03400
]
EH206_12885
Enzymes [BR:
bng01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
EH206_12885
DNA repair and recombination proteins [BR:
bng03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
EH206_12885
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EH206_12885
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EH206_12885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Peptidase_M48
Motif
Other DBs
NCBI-ProteinID:
QCR04998
LinkDB
All DBs
Position
2736684..2738111
Genome browser
AA seq
475 aa
AA seq
DB search
MADKTQPTFFIHDYETFGKHPARDRPAQFAGVRTDADFNIIGDPLVIYCKPTDDYLPEPE
AVLITGITPQLAATKGVNEAEFARRIYEAFSVPGTCIMGYNNIRFDDEVSRNLFYRNFYD
PYAYSWQHGNSRWDLLDALRACHALRPEGIVWPENDEGLPSFRLEHLTRANGIAHEHAHD
AMSDVYATIAMAQLLKQAQPRLFDYLFQLRNKNKVNALIDIAQMKPLVHVSGMFGAARGN
TSLVAPLAWHPDNRNAVIMCDLAGDMTPLLELDADTLRERLYTRRDRLSAGQSAVPIKLV
HINKCPVLAPVNTLRPEDADRLGIDRQRCRDNLALLRQYSQIREKVVALFAESPAFAAES
DVDLRIYDGFFGDADRMTMKIIQQTAPQNLPALDVKFVDDRLEPLLFRYRARNFPNTLDD
GEQQRWLQHRQEVFTTERLQQYVTELDALYQRYEGDKPKTDLIKALLAYVQALTS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaaacacaacctacgtttttcattcatgattatgagactttcggtaaacat
ccggcccgcgatcggcccgcgcagtttgccggggtacgcaccgatgcggacttcaatatt
atcggcgacccgctggtcatctattgcaagccgacggatgattatctgccggaacccgaa
gcggtattgattaccggcattacgccccagttggccgcaaccaaaggggtgaatgaagcg
gagttcgcgcgccgcatctatgaggcgttcagcgtgcccggcacctgcatcatgggctat
aacaatatccgtttcgatgacgaagtcagccgtaatctcttttaccgcaatttctatgat
ccctacgcctatagctggcagcacggcaactcccgctgggatctgctggatgcgttgcgc
gcctgccatgcgctgcgcccggagggcatcgtctggccggaaaacgatgagggactgccc
agcttcaggcttgagcatttaacccgcgccaacggcatcgcccatgagcatgcccatgac
gccatgtccgacgtctacgccaccatcgccatggcgcagttgctgaagcaggcgcagccc
aggctgtttgattatctgttccaactgcgcaacaagaataaggtcaacgcgctgattgat
attgcgcagatgaagccgctggtccatgtctccggcatgttcggcgcggcgcgcggcaac
accagtctggtggcccctctggcgtggcaccccgataaccgcaacgccgtcattatgtgc
gaccttgccggcgatatgacgccgctgctggagctggatgccgatacgctgcgcgaacgc
ctgtatacccgccgcgatcggttaagcgccgggcaaagcgcggtgcccatcaaactggtg
catatcaataagtgcccggtgctggcgcccgtcaatacgctgcgcccggaagacgccgac
cggctgggaatcgaccgccagcgttgccgggacaatctggcgctgctgcggcagtacagc
cagatccgcgagaaagtcgtcgcgctgttcgccgagtcgccggcctttgcggctgagagc
gacgtcgacctgcggatttacgacggctttttcggcgatgccgaccgcatgacgatgaag
attattcagcaaaccgcgccgcagaacctgcccgccctggacgttaaattcgttgacgac
cgtctggagccgctgctgttccgctatcgcgcgcgcaatttccccaacacgctggacgac
ggcgaacagcaacgctggctgcagcatcgccaggaggtgtttaccaccgaacgcctgcag
caatacgttaccgaactggacgcgctgtatcagcgctatgaaggggataaaccaaaaacc
gatctgatcaaggcgctgctggcatacgtgcaggcgttgaccagctaa
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