Brenneria nigrifluens: EH206_17080
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Entry
EH206_17080 CDS
T06070
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
bng
Brenneria nigrifluens
Brite
KEGG Orthology (KO) [BR:
bng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bng03400
]
EH206_17080
DNA repair and recombination proteins [BR:
bng03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EH206_17080
Archaeal homologous recombinant proteins
EH206_17080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
cobW
ABC_tran
AAA_15
nSTAND3
NTPase_1
AAA_27
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QCR05746
LinkDB
All DBs
Position
3634701..3638384
Genome browser
AA seq
1227 aa
AA seq
DB search
MKILSLRLKNLNALKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHATPR
LKNISASQNELMTRNTAECLAEVEFEVKGVGYRAFWSQRRARNSPDGNLQTPKAELARMD
DGTILCEKLTEKLEMTAAITGLDFGRFTRSMMLSQGQFAAFLNADANERAELLEELTGTD
IYGLISERVFDRHKQARIALDTLQARAAGIELLNDEQRRQLEAQLSSLTQREQALISERE
QALTYQRWFEQLAQHQQALTAGKERLVAAEEDMRQAQPALERLTQSEPAEKLRPLQQERD
RYHAESAALQKQLDGLTQHRLTQESVLLALRRQEDKTQQEQRRQADYRQQQETLIGERII
PLDHQINTLRQQRDKQQQELEQTQARQQEDRRKLEQAERQRQSAKQRLEQIHDYRRRHPH
HQRWGEYLSLWRAQFQRQRQLVEELANLRQKQARYEQQAEQLNLEADKLTAQRGGQHGAV
SHAQQQFDQHQQALQEADDRQPISDLYQQLNQSIARRPDRQRLATLGELFRQLGSRREQS
ATRQTQLQEQRGRLQEQRQRQSTELELRRQHLAEVDKNHQLEIRIVKLEEERRRLRPGEA
CPLCGSTHHPAVERYQALQTSETEQRLLRLSQEVGQSESALAHVEAQLAALQQQLDQLQH
DRGRMDEEYQTLLQQWREVSERLPGDYAPEQFAELTAWLAQCETQEQQIQRQIALREQAQ
RQRQESKDSLTNANTLLQQTEQQIALNTQQRQTLKNALSELRQAQQQSAEQQEQHRQEME
KTLADFSLGVPETAQQETWLAQRAEEWRVWKEAEQEQQQLSNAAAALEAERQHLTKTIEL
GEQQLLALRRQLLSHANALEESQRQRQQLFGDKSTAEVSAQLREKSRQCEQAGREIQAQR
QQAESSLDRLTGELTGVQQQQTRVAALRQQAEQDFAQALQHSVFADEEAFQRALLDEREH
NELRERKEKLHQQWQQATALYQQAERLLTAHRQQRPQTLAAEAALPWVQHRLGELNETLK
SNLQQQGEMRQQLTADQRHRQNQQALLAEIDQSQRHYDDWSCLNELIGSQKGDKFRKFAQ
GLTLDHLVYLANRQLVRLHGRYLLQRQTNDELKLQIVDTWQADALRDTRTLSGGESFLVS
LALALALSDLVSNKTSIDSLFLDEGFGTLDAETLDAALDALDNLNAGGKTIGVISHVEAM
KERIAVQIKVAKVNGLGISRLAPEFAL
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatactcagcctgcggttaaaaaacctcaatgccctgaaaggggaatggaaaatt
gatttcactcgcgagccctttgccagcaacggcctgttcgccattaccggccccaccggc
gcggggaaaaccacgctgctcgacgccatctgcctggcgctgtatcacgcgacgccgcgg
ctgaaaaacatttccgccagccagaatgagctgatgacccgcaacacggcggagtgcctg
gccgaagtggagttcgaggtcaaaggcgtcggttaccgcgccttctggagccagcgccgg
gccagaaactccccggacggcaacctgcaaacgccgaaagccgaactggcgcgcatggat
gacggcacgatcctgtgtgaaaagctgaccgaaaaactggagatgaccgccgccatcacc
gggctggatttcggccgctttacccgctcgatgatgttatcgcaggggcaattcgccgcc
tttctgaatgcggacgccaacgagcgcgccgaactgctggaggaactgaccggcacggat
atatacgggctgatttccgagcgcgttttcgaccggcacaaacaggccagaatcgccctg
gataccctgcaggcgcgcgcggcgggaatcgaactgctgaatgacgaacagcgccggcag
ttggaggcgcagctgtcatcgttaacgcaacgggagcaggcgctgattagcgagcgagag
caagcgctaacttatcagcgctggtttgaacaactcgctcaacatcagcaagcgctgacg
gccggcaaagaacggctcgtcgcggcggaggaggacatgcgccaggcgcagccggcgctc
gaacgcctgacgcaaagcgaaccggcggaaaaactcaggccgctccagcaggagcgggac
cgttaccacgccgagtccgcggcgctgcaaaagcagctcgacggcctgacgcaacatcgg
ctaacccaggagagcgtcctgctggcgctgcgccggcaagaggataaaacacagcaagaa
cagcgccggcaagccgactaccgccagcagcaggagacgctgatcggcgaacgcatcatt
ccgctggatcaccagatcaacaccctgcgccagcagcgggacaaacagcagcaggaactg
gagcaaacgcaggcgcgccagcaggaggatcgccgcaagctggaacaagcggagcggcag
cgccagtccgccaagcaacggctggagcagatccacgactatcgccggcggcaccctcat
catcaacgctggggggaatacctttcgctgtggcgcgcacagtttcagcggcaacggcag
ttggttgaggagctggcgaacctgcgccaaaaacaggcgcgctatgagcaacaggcggaa
cagctgaatctggaagcggacaaactgaccgcccagcgcggcggacagcacggcgcggtc
agccatgctcagcaacagttcgaccagcatcagcaggcgttgcaggaagcggacgaccgg
cagccgattagcgatctgtaccagcagcttaaccagtccatcgcccggcggcccgatcgc
cagcgcctggccaccctcggagagctgttccggcagctcggttcgcgcagggagcagtcg
gcaacccggcaaacgcagctacaggaacagcgcggccggttgcaggaacagcggcaacgg
caaagtacggagcttgagctgcgccgtcagcatctggccgaggtggataaaaatcatcag
ttggaaatacgcattgtaaagctggaagaggaaaggcggcggctacggccgggcgaagca
tgcccactgtgcggctcgacgcaccacccggcggtcgaacgctatcaggcgctgcagacc
tcggaaaccgaacaacgtctgctacgactgagccaggaggtcggccagtcagaaagcgcg
ctggcgcacgtcgaggcgcaactggcggcattgcaacaacagcttgaccagttgcagcac
gatcgcggccgcatggatgaggaatatcagacgttactgcaacagtggcgcgaggtcagt
gagcgcttaccgggggattacgcccccgagcaattcgccgaattaaccgcgtggctggcg
cagtgcgaaacccaggaacagcagattcaacggcagattgcgctgcgcgagcaggcccaa
cggcaacggcaggaaagtaaggattcactgaccaatgcaaataccctgctgcaacagacg
gagcagcagatagcgctgaacacccaacagcggcaaacgctgaagaatgccctctccgag
ctgcggcaagcgcagcaacagagcgcggagcagcaggaacagcatcggcaggaaatggaa
aaaacgctggcggatttctcccttggcgtgccggagacggcgcaacaggagacctggctg
gcgcaacgcgccgaagagtggcgggtctggaaagaggcagagcaggaacagcagcagcta
tcgaacgccgctgcggcgctggaagcggagcgtcagcatctgaccaaaaccatcgagctt
ggcgaacagcagctgttggcgttacggcgacagctgctgtcgcacgccaacgcgctggag
gaatcccaacggcagcggcaacagcttttcggtgataaatcgacggcggaagtcagcgcc
caactgcgtgaaaaaagccggcagtgcgaacaggccggccgggaaattcaggcgcaacgc
cagcaggcggagtcgtcgctggaccgcctgaccggagaattaaccggcgtacagcagcaa
cagacccgcgtcgccgcgctgcgccagcaggcagagcaggatttcgcccaggcgttgcaa
cacagcgttttcgcggatgaagaggcatttcaacgcgccttgctggatgaacgcgagcat
aacgaactgcgcgagcgcaaagaaaaactgcatcagcaatggcaacaggcgaccgcgctg
tatcaacaggcggagcggcttctgaccgcccatcggcaacagcgcccgcaaacgctggcg
gcggaagccgccctgccctgggtgcaacacaggctgggcgaattaaatgaaacgctgaaa
agcaatcttcagcagcagggggaaatgcgccagcaattaaccgccgaccagcgccaccgc
cagaatcagcaggcgctgctggcggaaatcgaccaaagccagcggcactatgacgactgg
agctgtctgaacgagctgatcggctcccagaaaggcgataagttccgcaaattcgcccag
ggactgacgctggatcatctggtgtatctggccaaccggcagcttgtccgtctgcacggc
cgttatctgttgcagcgccagaccaatgacgagttgaagctacagatcgtggatacctgg
caggccgacgcgctgcgggatacccgcacgctttccggcggggaaagttttctggtcagc
ctggcattggcgctggcgctctccgatctggtgagcaataaaaccagcatcgactcgctg
tttctcgacgagggcttcggcaccctggatgcggaaacgctggacgccgcgctggacgcc
ctcgataacctcaacgccggcggtaaaaccatcggcgtcattagccacgtcgaagcgatg
aaagaacgcattgccgtacagattaaggtcgccaaggttaacggcctgggcatcagccgg
ctggcgccggaatttgcgctttag
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