Brenneria nigrifluens: EH206_17430
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Entry
EH206_17430 CDS
T06070
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bng
Brenneria nigrifluens
Pathway
bng03030
DNA replication
bng03430
Mismatch repair
bng03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EH206_17430
03430 Mismatch repair
EH206_17430
03440 Homologous recombination
EH206_17430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bng03032
]
EH206_17430
03400 DNA repair and recombination proteins [BR:
bng03400
]
EH206_17430
Enzymes [BR:
bng01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EH206_17430
DNA replication proteins [BR:
bng03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EH206_17430
DNA repair and recombination proteins [BR:
bng03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EH206_17430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QCR05803
LinkDB
All DBs
Position
complement(3708323..3711805)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKVGPLVKKAASLGMPALAITDFTNLCGLVKFYGGAHGA
GIKPIIGADVYVASEELGDELAHLTLLAMDNEGYQNLTLLISHAYQRGYGAEGPTIDRHW
LIEKNSGLLLLSGGRNGDVGKFMLRGNQTQAEQCLAFYQQYFPDRYYLELIRTGRPDEES
YLHAAVELATRYGLPVVATNDVRFISEEDFDAHEIRVAIHDGYTLDDPKRPRNYSPQQYM
RTEEEMCQLFADIPEGLANSVEIAKRCNVTIRLGEYFLPQFPTGDMTTEDYLVKRAKEGL
EERLEFLFPDPQERAQKRLEYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNNVPVGP
GRGSGAGSLVAYSLKITDLDPLQFDLLFERFLNPERVSMPDFDVDFCMEKRDLVIDHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVISPTKITDFAPLYCDAEGNHPVTQ
FDKSDVEYAGLVKFDFLGLRTLTIIDWALEMINARRAKQGQEPIDIASIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDIEWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKNPVEM
AKQRGGFEDGAKSRGVDGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTDKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNQDGYFKELFDLCARTDIKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQVDMFGVLADAPEQVEQSYSTVAPWPEQVVLDGERETLGLY
LTGHPITQYLKEIERYAGGVRLKDMHPTERGKMTTAVGLVLAARVMVTKRGNRIGVCTLD
DRSGRLEIMLFTDALEKYQHLLEKDRILIASGQVSFDDFSGGLKMTVRELMDISEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVNLYYQREDARARLRFGAAWRITPTD
ALLNDLRTLVGNEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaccacgttttgttcacctgcgtgttcacagtgactattccatgatcgacggg
ctggcgaaggtcgggccgctggtaaagaaagcggcgtcgctgggcatgccggcgctggcg
attaccgatttcaccaacctgtgcgggctggtgaagttttatggcggcgcgcatggcgcc
ggcatcaagccgattatcggcgcggatgtctacgtcgccagcgaagaattgggcgatgaa
ctcgctcatctcacgctgttggcgatggataatgaaggctaccagaatctgacgctgctg
atttcccatgcttatcaacgcggctacggggccgagggtccgacgatagatcgccactgg
ctgattgagaaaaatagcggattgctgctgctctccggcggccgcaacggcgacgtcggc
aagtttatgctgcgcggcaatcagacgcaggccgaacagtgcctggcgttctatcagcaa
tatttccccgatcgttattacctggagctgatccgcaccgggcgcccggatgaagaaagc
tatctgcacgccgccgtggaactggcgaccagatacggcctgccggtggtggcgaccaac
gacgtccgctttatcagcgaagaggatttcgacgcccacgaaatccgcgtcgccatccac
gacggttatacgcttgacgatcccaaacggccgcgcaactacagtccgcagcaatatatg
cgcaccgaagaggagatgtgccagctgtttgccgatatccccgagggattggccaacagc
gtcgaaatcgccaaacgttgcaacgtgaccatccgcctgggcgaatacttcctgccgcaa
ttcccgaccggggatatgaccacggaagattatctggtcaaacgggcgaaagaagggctg
gaagagcgtctggaattcctgtttcccgatccgcaagagcgggcgcagaaacgcctggaa
tatgatgaacgcctggatatcgagctgcaagtcatcaaccagatgggcttccccggctac
ttcctgatcgtgatggagtttatccagtggtccaaggataacaatgtgcccgtcggtcct
gggcgcgggtcgggcgccggttcgctggtggcctactcgctgaagatcaccgatctggac
cctctgcagtttgacctgctgttcgaacgcttcctcaaccccgagcgcgtctccatgccg
gacttcgacgtcgacttctgcatggaaaagcgcgacctggttatcgatcacgtcgccgat
atgtacggccgcgacgcggtatcgcagattattaccttcggcaccatggccgccaaagcg
gtgatccgcgacgtgggccgggtgctgggccatccttacggttttgtcgatcgcatttcc
aaactggtgccgcccgacccggggatgacgctggaaaaagcctttgcggcggaaccgcag
ctgcctgaaatctacgaggcggatgaagaggtcaaggcgctaattgatatggcgcgcaag
ctggaaggcgtaacgcgcaacgccggcaaacacgccggcggggtggttatctcccccacc
aaaatcaccgacttcgccccgctgtactgcgatgcggaaggcaaccatccggtcacccag
tttgataaaagcgacgtcgaatatgccgggctggtgaagttcgacttcctcggcctgcgt
acgctgaccatcatcgactgggcgctggagatgattaacgcgcgccgggcgaagcagggt
caggagccgatagatatcgcctccattccgctggatgacaagaagagtttcgacatgctg
caacgctcggaaaccacggcggtgttccagcttgaatcgcgcggcatgaaggacctgatc
aaacgcctgaagcccgactgctttgaagatatgatcgcgctggtggcgctgttccgcccc
ggtccgctgcagtccggcatggtggataactttatcgaccgcaaacacgggcgcgaggcc
atctcctatccggatatcgagtggcagcacgaatcgctgaaaccggtgctggagccgacc
tacggcattatcctgtatcaggaacaggtaatgcagatcgcccaggtgctggcgggctat
accctgggcggcgcggatatgctgcgtcgcgccatgggtaaaaagaacccggtcgaaatg
gccaagcagcgcggcggttttgaagacggcgcgaagtcgcgcggggtggacggcgaactg
gcgatcaaaatcttcgacctggtggagaaattcgccggctacggatttaacaaatcgcac
tccgccgcctatgcgctggtctcctaccagactctgtggctgaaggcgcactatccggcc
gagtttatggcggcggtgatgaccgccgatatggacaacaccgataaagtggtcgggctg
gtggacgaatgctggcgcatggggctgaaaatcctgccgccggacatcaacagcggtctt
tatcatttccacgtcaacgacgacggcgagatcgtttacggcatcggggcgatcaagggc
gtcggcgaagggccgattgaagcgattatcgaagcgcgtaatcaagacggctatttcaaa
gagctgtttgatctgtgcgcccgtaccgatatcaagaaactgaaccgccgggtgctggaa
aagctgattatgtccggggcgttcgaccgcctggggccgcatcgcgccgcgctgatgaac
tcgctgggcgatgcgctgaaggccgccgatcagcacgccaaggcggaagccatcggccag
gtggatatgtttggcgtgctggccgatgcgcccgaacaggtcgaacagtcctacagtacg
gttgcgccctggccggaacaggtggtgctggacggtgagcgggaaacgctggggctctac
ctgaccggccatccgatcacccagtaccttaaggagatcgaacgttacgccggcggcgtg
cgtttgaaagatatgcacccgacggaacggggcaaaatgaccactgccgtgggcctggta
ctggccgccagggtaatggtcaccaagcggggaaaccgcattggcgtttgtactctggac
gatcgttccggtcgtctggaaatcatgctgttcaccgatgcgctggagaaatatcagcat
ttactggaaaaagaccgtatcctgatcgccagcgggcaggtcagctttgacgacttcagc
ggcgggcttaaaatgaccgtccgggagttgatggatattagcgaagcgcgggaaaaatat
gcgcgcggacttgctatctcgctgactgacaggcaaattgatgaccaactattaaaccgt
ctccgccaatcgctggaacctcatcgatcggggacgatcccggtgaatctctattaccag
cgtgaagatgcgcgcgcccggttgcgtttcggcgcggcatggcgcataacgccgacggat
gcgttgctgaacgatctgcgcacgttagtaggtaatgaacaggtggaactggaatttgac
taa
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