Brenneria nigrifluens: EH206_17680
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Entry
EH206_17680 CDS
T06070
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bng
Brenneria nigrifluens
Pathway
bng03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EH206_17680 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bng03400
]
EH206_17680 (recD)
Enzymes [BR:
bng01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EH206_17680 (recD)
DNA repair and recombination proteins [BR:
bng03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EH206_17680 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
Helicase_RecD
AAA_22
SH3_13
UvrD-helicase
AAA_16
PhoH
NTPase_1
nSTAND3
SLFN-g3_helicase
T2SSE
AAA_28
AAA
Motif
Other DBs
NCBI-ProteinID:
QCR05848
LinkDB
All DBs
Position
complement(3761850..3763886)
Genome browser
AA seq
678 aa
AA seq
DB search
MKMTNESVFALLDRWVECGWLRELDRSLALFLQQESADADPLLLLGAALVSYQLGRGHVC
LDLSAALNDSAFALALPPEGDRGNDHIPPPAQALAGVSLENWLAALRRHPLLVAEAAGNT
PLVLRGHRLYLRRYWQYEQDVRTAIEQRLAQGASWRAELPRATLRRLLSLLFKGNNGGRT
DWQKLACALAAGSGFSIITGGPGTGKTTTVVKLLALLQALALETRGQPLRIRLAAPTGKA
AARLNESIAGAMAHLPLAELGVELQDIDGKVVTLHRLLGSRPDTRHFRHHAGHPLMLDVL
VVDEASMVDLEMMAALLAAMPEHARLILLGDKDQLASVEAGALLGELCRRAAEGHYLPQT
RDWLLEVAAAAPDEAMIDPRGSELDQAIAMLRYSHRFGADSGIGQLATAVNQGDGQALAR
LWQRDYPDLARLTLDPGDAGAWRRWVIDGAADAFAPRAGIAPPVGYGHYLRVMAAERPDS
RAPQAAFDAWAAAVLEAFGRFQLLCALRRGTWGVEGLNARIAELLFDAGLLGAWRNWYPG
RPVLVTRNDYGQKLMNGDIGIALEVPQRLPDGGQKAGIRVAFPAGDGSGAIRWILPGRLP
SVETVFAMTVHKSQGSEFAHTALLLPDNLSPILTRELIYTGITRARHWFSLGGGERHDRV
LTDAVSRRVLRSGGLLLD
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaccaacgagagcgtattcgcgttactggatcggtgggttgagtgcggctgg
ctgcgcgagctggatcgctcactggcgctgtttctgcaacaggaatccgcggacgctgac
ccgttgctgctgctgggcgcggcgctggtcagctaccagttggggcgcgggcacgtctgc
ctcgatttatcggcggcgttgaacgacagcgctttcgcgctggcgctgccgccggagggc
gatcgcggcaacgaccatattccgccgccggcgcaggcgctggcgggcgtgtcgctggaa
aactggctggcggcgctgcggcgacatcccctgctggtggcggaggcggcgggaaatacg
ccgctggtcttgcgcggccaccgcctatatctgcgccgctactggcagtatgagcaggac
gtgcgcacggcgatagagcagcgcctggcgcagggcgccagctggcgcgccgagctgccg
cgcgccacgctgcgtcgtttgctaagcctgttgtttaagggaaataacggcgggcgcacc
gactggcaaaagttggcctgcgcgctggcggcgggcagcgggttcagtattatcaccggc
ggtccggggaccggtaaaaccaccacggtggtgaagctgctggcgttgttgcaggcgctg
gcgctggaaacccgcgggcagccgctgcgtatccgcctggcggcgcccaccggcaaggcg
gcggcgcgccttaacgaatccatcgccggggcgatggcgcatctgccgctggcggagctg
ggggtcgagctgcaggatatcgacggcaaagtggtgaccctgcaccgcctgctgggcagc
cgcccggatacccgccatttccgtcatcatgccgggcatccgttgatgctggatgtgctg
gtggtggatgaagcatcaatggtggatctggagatgatggccgcgctgctggcggccatg
cccgagcacgcccgcctgatcctgctgggcgacaaggatcaactggcgtcggtggaagcc
ggggcgctgctgggagagctgtgccggcgcgccgccgaggggcactatctgccgcagacg
cgggactggctgctggaggtggccgcagcggcgccggacgaggcgatgatcgacccgcgg
gggagcgagctcgatcaggcgatcgccatgctgcgttacagccaccgttttggcgccgac
agcggtatcgggcagttggcgacggcggtcaatcagggcgacggtcaggcgctggcgcgc
ctctggcaacgggattaccccgatctggcgcgcctgaccctggatcccggcgacgcgggc
gcctggcgacgctgggtgatcgatggcgccgccgatgctttcgcgccgcgggcgggcatc
gcgccgccggtgggctacggccactatctgcgggtgatggcggccgaacggccggattcg
cgggcgccgcaggcggcgttcgacgcctgggccgccgcggtgctggaggccttcggccgg
ttccaactgctctgcgccctgcgtcgcgggacctggggcgtggaaggattgaacgcgcgt
atcgccgaactgctgtttgacgccgggctgctgggcgcgtggcgcaactggtatccggga
cggccggtgctggtgacccgcaatgattacggacagaaactgatgaacggcgatatcggc
atcgcgctggaggtgcctcagcggctgcccgacggcgggcaaaaggcgggcatccgcgtg
gcgtttcccgccggcgacggttcgggggcgatccgctggatattgccgggacgtctgccg
tcggtggagacggtgttcgccatgacggtgcataagtcgcaaggttcggagttcgcccat
accgcgctgttgttgccggacaatctaagcccgattctgactcgggagcttatctatacc
ggcatcacccgcgcccgccactggtttagcctgggcggcggagagcggcacgatagggta
ttgaccgacgcggtgagccggcgggtattgcgctccggcggattgctgctcgattag
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