Brenneria nigrifluens: EH206_17685
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Entry
EH206_17685 CDS
T06070
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
bng
Brenneria nigrifluens
Pathway
bng03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EH206_17685 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bng03400
]
EH206_17685 (recB)
Enzymes [BR:
bng01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EH206_17685 (recB)
DNA repair and recombination proteins [BR:
bng03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EH206_17685 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_25
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QCR05849
LinkDB
All DBs
Position
complement(3763883..3767581)
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AA seq
1232 aa
AA seq
DB search
MNAQTMPSPLDVLNFPLSGSRLIEASAGTGKTFTIAMLYVRLVLGHGGERAFARPLTPPE
ILVVTFTDAATKELRDRIRARLTEAAGYFQRSPQEVAPRPANEDLLHDLRAEYPPEQWSG
CARKLQLAAEWMDEAAVSTIHGWCNRMLGEHAFDSDSLFSQTLETDQSELLLEVVRDYWR
TFFFPLDVKDIAALRNWWSEPDALYRSLKPLLEHVDLLGAVTPPQQVFAQAREEKARELA
ALKSGWDVWCGELRTLLEDAVAAKVVDGRKLRASYFLPWLEKLQAWANGADDTLDIGAGW
TRLTPAGLRECWKQGQPPDHPALTAMETLPEKLKNLPDARGGVLRHACRWVAARFQQEQQ
RRAQMGFNDLLVRLDAALSSENGPRLAQMIRQQFPLAMIDEFQDTDPLQYRIFDAVYRVK
ENDAQYGLILIGDPKQAIYAFRGADIFTYLRARRDTAGRHYTLTTNFRSTRAMIDAVNQV
FSLAESRSQGAGAFLFRRGDGENQVPFTAVRAKGRDERWLVEDAEAGAMTFQCVDEPEPL
SKTDYRRRMAAACADEIVRLLRLGQQRQAGFAAPGNDLLPVRPGDMAVLVNTGREAQAVR
DELKARGVRSVYLSDKESVFASPQAGELQYWLAACAEPENDRLLRAALGTATLGLSWPQL
DRLNHDEQEWESRVEQFQRYQKCWRKQGVLPMLRRLMWEFDVPRRLLSANDSRALTDLLH
LSELLQQAGGQLDGDHALIRYLAEQRRDENQGGDARKLRLESDAALVKVVTVHKSKGLEY
PLVFLPFACSFRAVSAKDSPLKWHDDQGNLRLSLNGSEAQLQLAERERLGEDLRKFYVAL
TRARYAIWLGMAWLKGAENSAAGYLLNAGETVEPAQLADLLLERYGATAEVRQLAPSETQ
VYRGEEHALALAAEPALPDIRSHRWRITSYSGLKIAPQGSYVDADAVAAPSPEVQSAAQE
TFSEAREVGASLTLPAAGNDLYGFPRGAAPGNFLHALLEWAGQEGFAALAQDRPRVEDQV
ARRCNRRGWQHWIPTLTDWLLALINQPLPMPAHKDDHAAGAMTLAGLNQSQYQVEMEFWF
SLSQVHTQRLDGYVRAATLDGAPRATLLPDELNGMLKGFIDLVFEHQGRYYVLDYKSNWL
GAEAADYDEANMARAMLDHRYDLQLTLYLFALHRLLKSRLADYDYDRHVGGALYLFLRGG
QAVSRGVCPQRPDKSLIESLERLFSADKAAKV
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcccaaaccatgccttccccgctggatgtgctgaatttcccgctgagcggcagc
cgtctgatcgaggccagcgccggcaccggcaaaaccttcaccatcgccatgctgtatgtg
cgcctggtgctggggcacggcggcgagcgggcctttgcgcgccccctgaccccgccggaa
attctggtggtcacctttaccgatgcggccaccaaagagctgcgcgaccgcatccgcgcc
cggttgacggaagccgccggttatttccagcgctcgccgcaggaggtggcgccgcgaccg
gcgaacgaggatttactgcatgacctacgggcggaatacccgccggaacagtggtcgggc
tgcgcgcgcaagctgcagctggcggccgagtggatggacgaagccgcggtatccaccatt
cacggctggtgtaaccgcatgctgggcgagcacgcgttcgacagcgacagcctgtttagt
caaacgctggaaaccgaccagagcgaactgctgctggaggtggtgcgcgactattggcgc
accttctttttccccctcgacgtcaaggatatcgccgcgttgcgcaactggtggagcgag
ccggacgcgctttaccgcagcctgaagccgctgctggaacacgtggatttgctgggcgcc
gtcacgccgccgcagcaggtgtttgcgcaggcgcgcgaggaaaaagcgcgggagctggcg
gcgctgaaaagcggctgggacgtctggtgcggggaactgcgcaccctgctggaagacgcc
gtggccgccaaagtggtcgacgggcgcaaacttcgggcgagctatttcctgccctggctg
gaaaaattgcaggcctgggcgaacggcgcggacgacacgctggatatcggcgccggctgg
acgcgcctgacgccggccgggctgcgcgaatgctggaaacagggccagccgcccgatcac
ccggcgctgacggcgatggaaaccctgccggaaaaattgaaaaacctgccggacgcccgc
ggcggcgtcttgcggcacgcctgccgctgggtcgccgcgcgttttcagcaggagcagcaa
cggcgggcgcagatgggattcaacgacctgctggtccggctggatgcggcgctgagcagc
gagaacggcccgcggctggcgcagatgatccgccagcagttcccgctggcgatgatcgat
gagtttcaggataccgacccgctgcaatatcgcattttcgacgccgtttaccgggtgaag
gaaaacgacgcgcagtacggcctgatcctgatcggcgatcccaagcaggcgatttacgcc
ttccgcggcgcagatatttttacctacctgcgggcgcggcgcgataccgccggccggcac
tacacgctgaccaccaacttccgctccacgcgggcgatgatcgacgccgtcaatcaggtg
ttttccctggcggagtcgcgttcgcagggcgccggggcttttctgttccgccgcggcgac
ggggaaaatcaggtgccgtttacggcggtgcgggccaaaggacgggatgaacgctggctg
gtggaggatgccgaagccggcgccatgacgttccagtgcgttgacgagccggagccgctg
tcgaaaacggattaccggcggcgaatggcggcggcctgcgccgatgaaatcgtgcggctg
ctgcgtttggggcaacaacgccaggccggttttgcggcgccgggaaacgatcttctgccg
gtacgtcccggcgatatggcggtgctggtcaacaccggccgcgaggcgcaggcggtgcgg
gacgaactgaaagcgcgcggcgtacgcagcgtctatctctcggataaggagtccgtcttc
gccagcccgcaggccggcgaactgcaatactggctggcggcctgcgccgaaccggaaaac
gaccgcctgctgcgcgcggcgctgggcaccgccacgctggggctgagctggccgcagctc
gacaggcttaaccacgacgaacaggagtgggagagccgggtagaacagtttcagcgctat
cagaaatgctggcgcaaacagggcgtgttaccgatgctgcgccggctgatgtgggagttc
gacgttccgcgccgcctgttgtccgccaatgactcgcgcgcgctgaccgatctgctgcac
ctgtcggaactgttgcagcaggccggcgggcagttggacggcgatcatgcgctgattcgc
tatctggccgaacagcggcgggatgagaatcagggcggcgatgcgcgcaagctgcggctg
gaaagcgacgcggcgctggtaaaagtggtgacggtgcataaatccaaggggctggagtat
ccgctggttttcctgcctttcgcctgctcgttccgcgcggtgagcgctaaggactcgccg
ctgaaatggcacgacgatcaggggaatctgcggctgtccctgaacggcagcgaagcgcag
ctgcagctggccgagcgtgagcgtctgggcgaagacctgcgtaagttctacgtggcgctg
acccgggcccgctatgccatatggctgggaatggcgtggctgaaaggggcggagaacagc
gccgccggctatctgctcaacgccggggagacggtggagccggcgcagctggcggatcta
ttgctggagcgctacggcgcgaccgccgaggtgcggcaactggcgccatcggaaacgcag
gtttaccgcggtgaagagcatgcactggcgctcgccgccgagccggcgctgccggatatc
cgcagccatcgctggcgcattaccagctattccgggctgaaaatcgccccgcagggcagc
tacgtcgacgcggacgccgtcgccgcgccgtcgccggaagtacagagcgcggcgcaggag
acgttcagcgaagcgcgggaggtcggcgcgagtttaacgctgccggcggcgggcaacgat
ctgtacggctttccgcgcggcgcggcgccgggcaattttctccatgcgctgctggagtgg
gccgggcaggaggggtttgccgctctggcgcaggatcgcccgcgggtcgaggatcaggtg
gcgcgccgctgtaaccgccgcggctggcagcactggatcccgacgctgacggattggttg
ctggccttgatcaaccagccgctgccgatgccggcgcataaagatgaccatgccgccggc
gcgatgacgctggccggattgaaccaatcacagtatcaggttgaaatggagttctggttc
tcgctcagccaggtgcatacccagcggctggacggttacgtcagggccgcgacgctggac
ggcgcgccgcgcgcgacgctattgccggatgaactgaacggcatgttgaaagggtttatc
gatctggtgtttgagcatcaggggcgctattacgtattggattacaagtccaactggctg
ggggcggaagccgccgattacgacgaggcgaacatggcgcgcgcgatgctcgatcaccgc
tacgatctgcaactgacgctgtacctgttcgcgctccatcgcctgctgaagtcccgcctg
gcggattacgactacgatcgtcacgtcggcggcgcgttgtatctgtttctgcgcggcggc
caggccgtgagccgcggcgtttgcccccagcgcccggataaatccctgattgagtcgctg
gaacggctgtttagcgccgataaggcggccaaggtatga
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