Bifidobacterium animalis subsp. animalis ATCC 25527: BANAN_01575
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Entry
BANAN_01575 CDS
T02047
Name
(GenBank) ribonuclease G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
bni
Bifidobacterium animalis subsp. animalis ATCC 25527
Pathway
bni03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bni00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BANAN_01575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bni03019
]
BANAN_01575
03009 Ribosome biogenesis [BR:
bni03009
]
BANAN_01575
Enzymes [BR:
bni01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
BANAN_01575
Messenger RNA biogenesis [BR:
bni03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BANAN_01575
Ribosome biogenesis [BR:
bni03009
]
Prokaryotic type
rRNA processing factors
BANAN_01575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
AFI62537
LinkDB
All DBs
Position
376618..379734
Genome browser
AA seq
1038 aa
AA seq
DB search
MIRDAVAARRMRSTVPDLTENGLGSPEFDNTDTTDSTPTRRRRGRRVVRSAGEAGAQMQL
EVHDRVPLFQEPSAAIEAGKPAKALPAGSHAEESAESEDSNEPTATRRRSRRASTSTRSR
STRTANDEAEEPTTTRSRRGRGATQNDDEEPTVHTRRRSRAQAEEAEEPRSTHSRRSRRT
VSDESEQTNDDSYESRTQHVLDALDESFDDDAETHETGRGRSRSRSRSRTGRREVLEDAN
QHESADVENDQEESSARGNRRGGRPMTSLLFQEPVLPARSRSTHDEENDEDADDEPLHDL
DLNEGSTRSRKRSRNRRLNAQERRAAAEVEQIEEDLVLDDIVYAPIDDETGRSGDESDSE
ESGTHTRRRRRRKSQENANAEREESENEESTRTRRRSRAEDEEENDESTVTRRRRRRRNS
KGGEEEEQPRRSRKQQYIDEITDVEGSTRLEAKKQRRRDNRRERSRQNQLLEQDFLARRE
NVDRLMVVRERGRHTQISVIEDNVLVEHYVSDIQEVATVGNIYLGRVQNVLPSMEAAFVD
IGQARNGVLYAGEVNWDATRLEGQPRRIELAFKSGDPVLVQVTKDPIGHKGARLTSQVTL
AGRFLVLVPSGGMTGVSRKLSDRERNRLKSIVSKIAPKDMGVIIRTAAEGASEEAIAKDL
EGLTNQWAEIQRKREEFLHGKRPKLLQGEPDVAIRVVRDIFNDDFNKMIVEGDGVYHRIE
EYLDHMAPDLCNKLERWDPEEHGGKDVFDKWQIDSQLRKGMERQVYLPSGGSIVIDRTEA
MTTIDVNTGRFIGKGKSLEETVTRCNLEASEEIARQLRLRDIGGMVMIDYVDMVMPANRD
LVLRRLVECLARDRTKHQVAEVTSLGLVQMTRKRIGQGLVEAFSEECPECKGRGFIVHDE
PTISAEFDDPYAMKGGDPFVRTNKHGHGTPEVHAPKGSSAAVKAKLAQIAAAAVAANVAA
EAEASVEAPAADTTEETAEVGVAVESTVESAADSADNASGSEHVDGAVEQVEGEVIDDTE
QSADDAAMVTVEDVAEES
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgattcgcgacgccgttgcagcgcgccgcatgaggagcactgtgcccgatttgaccgag
aacggcttgggttcgcccgagttcgacaataccgataccaccgattccacccccacacgc
cgccgtcgcggccgccgtgtggtgaggagcgccggagaggcgggcgcccagatgcagctc
gaagtgcacgaccgcgtgccgctgtttcaggaaccgagcgccgcaatcgaagccggcaag
ccggccaaggcgcttcctgcgggaagccacgcggaggaatccgcggaatccgaagactcc
aacgagcctacggcaacgcgtcgccgctcgcgccgtgccagcacctccaccaggtcgcgc
agcacacgcaccgcgaatgacgaggcagaggagcccacgacgacgcgttcgcgccggggc
cggggcgcgacacagaacgatgatgaggagccgaccgttcatacgcgccgccgctcgcgt
gcgcaggcagaagaagccgaggagccgcgcagcacccattcgcgtcgaagccgccgcacg
gtgtccgacgaatctgagcaaaccaatgacgacagctatgagagccgcacccagcacgtg
cttgatgcgttggatgagtctttcgacgacgatgccgagacccacgagaccggccgcggc
cgttcacgctcgcgttcccgttcccgcacgggtcgtcgtgaggtgctcgaagacgcgaat
cagcatgaatctgcagatgtggagaacgaccaggaggaaagcagcgcgcgcggcaatcgc
cgtggcggccgcccgatgacctccttgctgttccaggagccggtgctgccggcacgttcg
cgttccacccacgacgaggagaatgacgaagacgccgacgacgagccgctgcacgatctc
gatctcaacgaaggcagcacccgctcccgcaagcgttcacgcaatcgccgactgaacgcg
caggagcgtcgcgcggccgccgaagtcgagcaaatcgaggaagacctcgtgctcgacgac
atcgtctatgcgccaatcgacgacgaaaccggaaggtcgggcgacgaatccgacagcgag
gagagcggcacccatacgcgtcgccgtcgccgccgcaagtcgcaggagaacgcgaatgcg
gaacgcgaggaatccgagaacgaggagagcacccgcacccgtcgccgttcgcgcgccgag
gacgaggaggagaacgacgagagcacggtgacgcgccgccgtcgccgtcgccgcaactcg
aagggcggtgaggaagaggaacagccacgccgttcacgcaagcagcagtacatcgatgag
atcaccgatgtcgaaggctcgacgcgtctcgaggcgaagaagcagcgccgtcgcgacaac
cgccgtgaacgcagccgccagaaccagctgctcgaacaggacttcctcgcgcgccgcgag
aacgtggaccggctcatggtcgtgcgtgaacgtggacgccatacgcagatctcggtgatc
gaagacaacgtgctcgtcgagcattacgtctccgacatccaggaggtcgccaccgtgggc
aacatctaccttggccgtgtgcagaacgtgctgccgagcatggaggccgcattcgtggac
atcggccaggcccgcaacggtgtgctgtacgccggcgaggtgaactgggacgccacgcgt
ttggagggtcagccgcgcaggatcgagctcgcattcaagtcgggcgatcccgtgctcgtg
caggtgacgaaagacccgatcgggcacaagggcgcacgactgacgagccaggtgacgctc
gccgggcgcttccttgtgctcgtgccatccggcggcatgaccggcgtgagccgcaagctc
agcgaccgcgaacgcaaccgcctgaagtcgatcgtttcgaagatcgcaccgaaggacatg
ggtgtgatcattcgcaccgcggccgagggggcgtccgaagaggcgattgcgaaggatctc
gaggggctgaccaaccagtgggccgagattcagcgcaagcgcgaggagttcctgcacggc
aagcgtccgaagctgctgcagggcgagcctgacgtggcgattcgcgtggtgcgcgacatt
ttcaacgacgacttcaacaagatgattgtggaaggcgacggcgtgtaccaccgcatcgag
gagtacctcgaccacatggcacccgatttgtgtaacaagctcgagaggtgggacccggaa
gagcacggcggcaaggacgtgttcgacaagtggcagatcgactcgcagctacgcaagggt
atggaacgccaggtctacctgcccagtggcggctccattgtgatcgaccgcaccgaggcg
atgacgacgatcgacgtgaacaccggccgtttcattggcaagggcaagtcgctcgaggag
acggtgacgcgatgcaatctggaggcgagcgaggagatcgcacgtcagctgcgtctgcgc
gacatcggtggcatggtcatgatcgactatgtggatatggtgatgccggcgaaccgtgat
ctcgtgctgcgtcgtctggtggaatgcctggcccgcgaccgcaccaagcaccaggtggcc
gaggtgacgtcgctcggactcgtgcagatgacgcgcaagcgcatcgggcaggggctcgtc
gaggcgttctccgaggagtgcccggagtgcaagggacgcgggttcattgtgcatgacgag
cccacgatctccgcggaattcgacgatccgtacgcgatgaagggcggcgatccgttcgtg
cgcacgaacaagcatgggcatggcacgcccgaagtgcatgcgccgaagggctcgtccgcg
gcggtcaaggccaagctcgcgcagattgccgccgcggcggtggctgcgaatgtggccgcg
gaggccgaggcgagtgtggaggctccggcggccgacacgacggaggaaaccgccgaggtc
ggcgtggcagtggaatccaccgtggaatctgcagcagactccgcagataatgcgagcggc
tccgaacatgttgatggggcggtcgagcaggtcgaaggcgaagtgatcgacgacaccgag
caatctgccgatgacgccgccatggtgacggtggaggacgtggccgaggaatcctga
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integrated database retrieval system
