Bifidobacterium animalis subsp. animalis ATCC 25527: BANAN_01675
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Entry
BANAN_01675 CDS
T02047
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bni
Bifidobacterium animalis subsp. animalis ATCC 25527
Pathway
bni03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bni00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BANAN_01675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bni03019
]
BANAN_01675
03016 Transfer RNA biogenesis [BR:
bni03016
]
BANAN_01675
Enzymes [BR:
bni01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BANAN_01675
Messenger RNA biogenesis [BR:
bni03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BANAN_01675
Transfer RNA biogenesis [BR:
bni03016
]
Prokaryotic type
tRNA degradation factors
BANAN_01675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
KH-I_KHDC4-BBP
RNase_PH_C
KH_2
PCB_OB
S1_RRP5
KH_NusA_1st
Motif
Other DBs
NCBI-ProteinID:
AFI62557
LinkDB
All DBs
Position
408880..411555
Genome browser
AA seq
891 aa
AA seq
DB search
MEGPEIKAVEAVIDNGSFGKRTVRFETGRLAQQADGAVAAYLDDDSMVLSTTTAGSSPKE
NYDFFPLTVDVEEKMYAAGKIPGSFFRREGRPSSEAILACRIIDRPLRPLFPHTLRNEVQ
VVETVLAVNPEDSYDVLALNAASASTLISGLPFTGPVGGVRLALIDGQWVAFPRWSERER
AVFEIVVAGRVVESGDVAIAMIEAGAGKNAWNLIYNEGQAKPDEEVVAGGLEAAKPFIKV
LCDAQNELKRLAAKETREFTLFPEYTEDLYNRIDEIAHADLDGALSIAEKLPRQERIAEI
KQRVKDTLSVEFTDMDEMEKDKEIGNAFKELQRQIVRRRILTQDYRIDGRGLRDIRTLSA
EIDVVPRVHGSALFQRGETQILGITTLNMLKMEQQIDALSGPTTKRYMHNYEMPPYSTGE
TGRVGSPKRREIGHGALAEKAIVPVLPSREEFPYAIRQVSEAIGSNGSTSMGSVCASTLS
LLAAGVPLKAPVAGIAMGLVSGDVDGQHIYKTLTDILGAEDAFGDMDFKVAGTADFITAL
QLDTKLDGIPADVLAGALKQAHEARKTILEVINECIDGPAEMSPFAPRIITTTVPVDKIG
EVIGPKGKMINQIQEDTGAEIAIEDDGTVYISSEGGEAAEKAKQIIDEIANPHVPQAGET
YKGTVVKTTSFGAFVNLTPGTDGLLHISQIRNLADGQRIDAVEDVLKEGDSVEVVVQGVD
DRGKISLAIPGFENQANNAGGRRSDDRPRRDDRRHSDDRRRDDRPRRRSDDRDDRDDRDD
RPRRRSDDRDRDYDDRPRRRRDYDDDRDYDDRPRRRSHRDYDDDRDYDDRPRRSDRRRDD
DRDDRPRRRRNDDRNPRYVADENYDEYREGREVRHERPRRRVRRDFDPFDD
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcccgaaatcaaggctgttgaagccgtaattgacaatggttcgttcggcaag
cgcacggtgcgcttcgagaccggacggctcgcacagcaggcggacggcgccgtggccgca
tacctggacgacgattcgatggtgctttccaccacgaccgccggctccagcccgaaggag
aactacgacttcttcccgctcaccgtggacgtggaggagaagatgtacgcggccggcaag
atccccggctcgttcttccgccgtgaaggccgcccgagctccgaggccattctggcctgc
cgcatcatcgaccgtccgctacgtccgctcttcccgcacacgctgcgcaacgaggtgcag
gtcgtggagaccgtgctcgccgtgaacccggaggattcctacgacgtgctcgccttgaac
gcggcctccgcatccacgctcatctccggtctgccgttcaccggcccggtcggcggcgtg
cgactcgcgctgatcgacggccagtgggtcgcgttcccacgttggagcgaacgtgaacgc
gccgtgttcgaaatcgtggtggccggccgtgtggtcgaaagcggcgacgtcgccatcgcc
atgatcgaggccggcgccggcaagaacgcatggaacctcatttacaacgagggccaggcc
aagcccgatgaagaggtcgtggccggtggtctggaagccgccaagccgttcatcaaggtg
ctgtgcgatgcgcagaacgagctcaagcgcctcgccgccaaggagacccgcgagttcacg
ctgttccccgagtacaccgaagacctgtacaaccgcatcgacgagattgcgcatgccgac
ctggatggggcgctgtcgatcgccgagaagctgccgcgtcaggagcgcatcgccgagatc
aagcagcgcgtcaaggacacgctgtccgtcgagttcaccgacatggacgagatggagaaa
gacaaggagatcggcaacgcgttcaaggagctgcagcgccagatcgtgcgccgtcgcatc
ctcacgcaggactaccgcatcgacggccgtggcctgcgtgacatccgtacgctctccgcc
gagatcgacgtggtgccccgcgtgcatggctccgctctgttccagcgcggcgaaacgcag
atcctgggcatcaccacgctcaacatgctcaagatggagcagcagatcgacgccctgtcg
ggcccgaccaccaagcgctacatgcacaattacgagatgccgccgtattcgaccggtgag
accggtcgcgtcggctccccgaagcgccgcgagatcggccatggcgccctcgccgagaag
gccatcgtgccggtgctgcccagccgtgaggagttcccgtacgccatccgccaggtttcc
gaggctatcggatccaacggttccacctctatgggctccgtgtgcgcctcaacgctgtcg
ctgctcgcggccggcgtgccgctcaaggcaccggtggcgggcatcgcgatgggcttggtc
tccggcgatgtggacggccagcacatctacaagacgctcaccgacattctcggtgccgag
gacgccttcggcgacatggatttcaaggtcgccggcaccgccgacttcatcaccgccctg
cagctcgacaccaagctcgacggcattccggccgacgtgctcgccggcgcgctcaagcag
gcccatgaagcacgcaagaccattctcgaggtgatcaacgagtgcatcgacggcccggcc
gagatgagcccgttcgcaccgcgcatcatcaccaccaccgtcccggtggacaagatcggc
gaggtcattggcccgaagggcaagatgatcaaccagattcaggaagacaccggcgccgag
atcgcgatcgaagacgacggcaccgtctacatctcctccgaaggtggcgaggccgccgag
aaggcgaagcagatcatcgacgagatcgccaacccgcacgtgccgcaggccggcgagacc
tacaagggcaccgtggtgaagaccacatcgttcggcgctttcgtcaacctgacgccgggc
accgacggcctgctgcacatctcgcagattcgcaacctcgccgatggccagcgcatcgac
gccgtcgaggacgtgctcaaggaaggcgattccgtggaggtcgtggtgcagggcgtcgac
gaccgcggcaagatctccctggccatcccgggcttcgagaaccaggcgaacaatgccggt
ggacgccgttccgacgaccgtccgcgccgtgatgaccgccgtcattccgacgaccgccgc
cgtgacgatcgtccgcgccgccgttccgacgatcgcgatgaccgtgacgatcgcgatgac
cgtccgcgccgccgttccgacgaccgtgaccgtgactacgacgaccgtccgcgccgtcgc
cgtgactacgacgatgaccgtgattacgatgatcgtccgcgtcgccgctcacaccgtgac
tacgatgacgatcgcgattacgatgatcgtccgcgtcgctccgaccgccgccgtgacgac
gatcgcgatgatcgtccgcgccgtcgccgcaatgatgatcgcaatccgcgctatgtcgcc
gatgagaactacgacgaataccgcgagggacgtgaggtgcgccacgagcgtccgcgtcgt
cgcgtgcgccgcgacttcgatccgttcgacgactga
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