Bifidobacterium animalis subsp. animalis ATCC 25527: BANAN_04685
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Entry
BANAN_04685 CDS
T02047
Name
(GenBank) Superfamily I DNA and RNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bni
Bifidobacterium animalis subsp. animalis ATCC 25527
Pathway
bni03420
Nucleotide excision repair
bni03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BANAN_04685
03430 Mismatch repair
BANAN_04685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bni03400
]
BANAN_04685
Enzymes [BR:
bni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BANAN_04685
DNA repair and recombination proteins [BR:
bni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BANAN_04685
MMR (mismatch excision repair)
Other MMR factors
BANAN_04685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
SidE_PDE
Sec8_N
LysM
Motif
Other DBs
NCBI-ProteinID:
AFI63149
LinkDB
All DBs
Position
complement(1104674..1107400)
Genome browser
AA seq
908 aa
AA seq
DB search
MPQDVDFIARPPQELIGDLNEQQAQAVQYRGPALLIGAGAGSGKTRVLTRRIAWILTQFG
AWPSQVLAITFTNKAATEMRERLGALIGGVADRMWVSTFHSACVRILRRDGEQIGLKSGF
TIYDTADCERLIKLICADFNIDIKRFTPRSILARISDYKNQLTDASAALAQYAPDFKPGM
RHYSFGQIGNPEPVYAVVYAEYQYRLALANAVDFDDLIVRTVELLRTQPHVAEYYRHKFR
YILVDEYQDTNHAQYVLVRELAGVDAHEPSDPTATGAGKSGPAWVTVVGDSDQSIYAFRG
ADIRNIQDFEKDFPDARTIMLEQNYRSTQTILDAANAVIAHNSARKPKKLWTALGEGDKI
IGYAADTAQLEAHWIAQQILHLHEEKGLPYSDMAIMYRANAQSRSLEEGLIQAHIPYQLI
GGTKFYERREVKDAIAYLQAIVNPADDINMRRILNVPKRGLGARAESQLTLFANEHSQTF
WWAIEHLEDIEGMSARTANAVRAFRELMTSLRAFAGEHDSKPSEIVAQVLEQSHMLELLR
KSEDPQDESRVENLSQLQSVAAEFEQNTPDTTLAGFLETTALVADSDQLPGEGHDSGKVT
LMTLHTAKGLEYPIVFLTGMEQGTFPHSRAMENMDELSEERRLAYVGITRAKRRLYLTRA
AVRAQWGRQSEMMPSQFLDEIPDSLIDWKRREAGMERMRSGWRNDGFDDGFSDEFGGWDD
GDSDYGAGAYGRSSYGSSGRSRTSSGSDFGSHAYGSSGTASNAVAAGTGWGSAATFKSSS
GHSAYGSESYSSGRSRGSGSSTGAYGARWSHGGSSSSRSSASRSGAVHTRHTTAKAPQSQ
GMPISQIATDNNLDIADLHVGDRITHDRFGLGKVVQTQDKGKNSVITVDFGSTGVKRLML
RLAPIEKL
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
ttgccacaggacgttgatttcatcgcccgtccaccccaagagctcatcggcgatctgaac
gagcagcaggcccaggcggtgcagtaccgcgggcccgcgctgctgatcggcgccggcgcg
ggatcgggaaagacgcgcgtgctcacgagacgcatcgcgtggatcctcacccaattcggg
gcatggccaagccaagtgctggccatcaccttcacgaacaaggcggcaaccgagatgcgc
gaacgtcttggcgcattgatcggcggcgttgccgatcgcatgtgggtctccacgttccac
tcggcgtgcgtgcgcatcctgcgccgggacggtgagcagatcggtctcaaatctggcttc
accatctacgacaccgcggattgcgagcgtctcatcaagctcatctgcgctgacttcaac
atcgacatcaaacgcttcaccccgcgatccatcctcgccagaatcagcgactacaagaac
cagctcaccgatgcgagcgcggccttggctcagtatgcccccgatttcaaacccggcatg
cgtcactattccttcgggcagataggcaatccggaaccggtgtatgcagtggtttatgcc
gaataccagtatcgtctcgccctggcgaacgccgtggatttcgacgatctgatcgtgcgc
acggtggagctgctgcgaacccagccgcatgtcgccgaatactaccggcataaattccgc
tatattctcgtcgacgaataccaggacacgaaccatgcccaatatgtgctcgtgcgcgag
ctcgcgggtgtggatgcccatgaaccgagtgatcccacggccacgggggccggaaagagc
gggccggcgtgggtcactgtggtgggtgattccgaccagtcgatctacgcattccgcgga
gcagacatacgcaacatccaggatttcgagaaggacttcccggatgcgcgcacgatcatg
ctcgaacagaactaccgttccacgcagacgattctcgatgccgcgaatgccgtgatcgcc
cacaacagcgcgcgcaagccgaaaaaactgtggaccgcactcggcgaaggcgacaagatc
atcgggtacgcggccgacaccgcgcaactcgaggcgcattggatagcccaacagattctc
cacctgcatgaggagaagggattgccttacagcgacatggcaatcatgtatcgagcgaac
gcccagtcccgttccctcgaggaggggctcattcaggcgcatatcccgtaccagctcatc
ggaggcacgaagttctatgagcgccgtgaggtcaaggacgccattgcctacctgcaggca
atcgtgaacccggcagatgacatcaacatgcgccgcatcctcaacgtgcccaagcgaggc
cttggcgcgcgtgcggaatcacaactcacgctgttcgcgaacgagcacagccaaacgttc
tggtgggcgatcgagcatcttgaggacatcgagggcatgagtgcccgtacggcgaatgcg
gtgcgtgccttccgtgaactcatgacgtcgctgcgggcattcgccggagagcatgactcc
aagcccagcgagattgtggcgcaggtgctcgagcagtcgcatatgctggagctgctgcgc
aaatccgaggacccgcaggacgaatcgcgtgtggagaacctttcccagctgcagtcggtg
gccgcggagttcgagcagaacacaccggataccacccttgccggcttcctcgagaccacc
gcgctggtcgctgattcggaccagttgccgggggagggccacgacagcggcaaggtgacg
ctgatgacactgcatacagccaagggtctggaatacccgattgtgttcctcacgggcatg
gagcagggtaccttcccacattcgcgcgccatggagaacatggatgagctctccgaggaa
cgcaggctcgcctacgttggcatcacgcgtgcgaaacgcaggctgtacctgacgcgcgca
gccgtgcgcgcgcagtgggggcgtcagagcgaaatgatgccgagccagttcctcgacgag
atccccgattccctcatcgactggaagcgtcgcgaagccggtatggagcgcatgcgttcc
ggctggcgcaacgatggtttcgacgacggcttctccgacgaattcggcggatgggatgac
ggggactctgattatggtgcaggcgcctatgggcgctcgagctatggttcctcgggtcgc
tcccgcacttcctcgggttcggatttcggctcccatgcctatggttcctcgggtaccgcg
tcgaatgccgtcgctgcaggcaccggatgggggagcgccgcgacgttcaaatcgagttcg
ggccactctgcatatggttcggaatcgtattcctcgggccgctcacgaggctccggatcc
tctacgggtgcatatggagcccgctggtcgcatggaggttcctcatcatcccgttcctcg
gcttcccgttcgggtgctgtgcataccaggcacaccactgcaaaagcacctcaatcacag
gggatgcccatttcgcagattgccaccgacaataatctcgatatcgcggatctccacgtg
ggggacaggatcacccatgaccgtttcggattgggcaaggtggttcagacgcaagacaag
ggcaagaactcggtgatcaccgtagatttcggttccactggtgtcaaacggctcatgctc
cgtctggcgcccattgagaagctgtag
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