Bifidobacterium animalis subsp. animalis ATCC 25527: BANAN_05315
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Entry
BANAN_05315 CDS
T02047
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bni
Bifidobacterium animalis subsp. animalis ATCC 25527
Brite
KEGG Orthology (KO) [BR:
bni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bni03016
]
BANAN_05315
Enzymes [BR:
bni01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BANAN_05315
Transfer RNA biogenesis [BR:
bni03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BANAN_05315
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AFI63271
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All DBs
Position
complement(1258794..1260095)
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AA seq
433 aa
AA seq
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MDSVNKEPVLQTEPKEGVPEVTDTLAGFELICEQYTAVNTPLAADAERASGYRYGHEDWL
IQFKRDGAPIALLDPIALDEQGVDWNAFNEAVGDAEWILHDSRQDLPGFAQIGLKPRRLF
DTEIAAKLLGLHRVGLAYVTAHFLGITLAKEHSAADWSYRPLPRDWRNYAALDVELLSDL
ERAMTHELKRQGKWEWAQEEFDYALHEGLRPPKPHPVPWMRISHINVLQRDRRGLAVAKA
LWTERDRLAREYDISPSLLLADAAIIEAAQRKPHNASQFRAVRSLNERVRMHLGNEQDKM
FERYAPIQRKVKPSLWKRTIQEALDLPSDELPELPGKAAGHGEDVVNAPRSAKFWQTHEP
KRYRQLQRCKAVLNQISQDTRTPPDVLLKPQILRNLCWTDHPHRRDVAQFLAQQGARPWQ
VDLLSESLTRAIM
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
ttggattcggtgaacaaggaaccggtgctgcagaccgagccgaaggaaggggttcccgaa
gtcaccgacaccttggctggcttcgagctcatctgcgaacaatacacagcggtgaacacc
ccactggccgccgatgccgaaagggccagtgggtaccggtacggccacgaggactggctc
atccaattcaaacgtgacggtgcgccgatagcgctgctcgatccgatcgccctcgatgaa
cagggtgtggattggaatgcgttcaatgaggctgtgggcgacgcggaatggattctgcac
gattcacgtcaggacctccccggattcgcccagatcggcctgaagccgcgccggctgttc
gataccgagatcgccgccaagctgttggggctgcatcgggtcggccttgcctatgtgacg
gcgcatttccttggcatcacgctggccaaggagcattcggcagccgattggtcataccgc
ccgttgcctcgcgattggcgcaactatgccgcactcgacgtcgaattgctctccgatctc
gagcgggcaatgacgcatgagctgaaacggcagggcaagtgggaatgggcgcaggaggag
ttcgattatgccctgcacgagggattgcggcctcccaaaccgcatccggtgccatggatg
cgcatctcgcatatcaatgtgctgcaacgcgaccgtcgaggactcgccgtggccaaggcg
ctatggaccgaacgggaccgactcgcccgcgaatatgacatctcgccatcgctgctgttg
gcggatgccgcaatcatcgaagcggcgcagaggaagccgcacaatgccagtcagttccgt
gcagtgcgctcgctcaacgaacgggtgcgcatgcatctgggcaacgagcaggacaagatg
ttcgaacgctatgcgcccatccagcgcaaagtcaagccgtcgctatggaaacggacaatc
caggaggcgctggacctgccttccgacgagctgcccgagcttcccggcaaagcggctgga
cacggtgaggatgtggtgaatgcgccacggtccgcgaaattctggcagacccatgagccc
aaacggtaccggcagctccagaggtgcaaggccgtgctgaaccagatctcgcaggacacc
cgcactccccccgacgtgctgctcaagccgcagatcctgcgcaacctatgctggacggac
catccacatcgtcgtgatgtggcccaattccttgcgcaacaaggcgccagaccatggcag
gtcgacttgctcagcgagtcgctgacccgcgctatcatgtaa
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