Bombiscardovia nodaiensis: KIM372_00580
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Entry
KIM372_00580 CDS
T09715
Symbol
pbp
Name
(GenBank) penicillin-binding protein
KO
K05364
penicillin-binding protein A
Organism
bnk
Bombiscardovia nodaiensis
Pathway
bnk00550
Peptidoglycan biosynthesis
bnk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bnk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KIM372_00580 (pbp)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bnk01011
]
KIM372_00580 (pbp)
Peptidoglycan biosynthesis and degradation proteins [BR:
bnk01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
KIM372_00580 (pbp)
BRITE hierarchy
Motif
Pfam:
Transpeptidase
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
BDR52151
LinkDB
All DBs
Position
complement(80155..81618)
Genome browser
AA seq
487 aa
AA seq
DB search
MNKALRQLFNAVIVLFVILGLSSTMIMAVRANALNNDPRNTRALYAEYGAPRGSILASDG
SILAHSDPINDTFQYQRKYTAGPLYAPVTGFYSITNGSDRGIENSRNRLLTGQADSLWFD
KIRALFTGAQNKGASIETSINPKLQQAAYQALGNQSGSVVAIEPSTGRVLAMVSTPSYDP
NALATHDNNAAIQTYSDIVQDPSNPMLNRATSQLYPPGSTFKVIVAAAALESGKYQIDTQ
VPAGAAYTLPGTATNLTNATAAGNGSNGKISLQDAMAYSSNTAFAQLGVSLGSEALNTEA
KKFGYGSTITVDGTDASGNPMKATASKFPADATPDKLAQASIGQGDTLNTPLQNAMVAAA
VANGGKLMQPTLVDRVRSSDLSVLSETSPSIYSEPFSQDTAKALTTMMEGVVTKDSPNLQ
IPGAQVAAKTGTAQIGLTNSANDGWTIGFAPAQQPKIAIAVVVHSTSTYGAASAGPIMKQ
VMQEALK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaataaggccctacgccagctttttaacgccgttatcgtgctcttcgtcatcttgggg
ctctcctccaccatgattatggccgtgcgggccaacgcgctcaacaacgacccgcgcaac
acccgcgccctctacgccgagtacggcgccccccgaggctctattctggcttctgacggc
tctattttggcccattcagaccccatcaacgacaccttccagtaccagcgcaagtacacg
gcgggccccctgtacgcccccgtcaccggcttctactccatcaccaacggctccgaccgc
ggcattgagaactcccgcaaccgcctcttgactggccaggccgacagcctctggttcgac
aaaattcgtgccctcttcaccggcgcacagaacaagggcgcttccatcgagacctccatc
aaccccaagctccagcaggcggcctaccaggccctgggcaaccagtccggctcggtggtg
gccattgagccttcgaccggccgcgttctggctatggtttccactccttcttacgacccg
aacgcgctggccacgcacgacaacaacgcggccatccagacttacagcgacatcgttcag
gacccctcgaaccccatgctcaaccgcgccacctcgcagctctacccgcccggctccacc
ttcaaagtgattgtggccgcagcagccctcgagtccggcaagtaccagattgacacgcag
gttcccgcaggagccgcctacaccctgcccggcacggccacgaatttgaccaacgccacg
gctgctggcaatggctccaacggcaaaatttccttgcaagatgccatggcctactcctcg
aacacggcctttgctcaactgggagtaagcctgggcagcgaagcgctcaacaccgaagcc
aagaagtttggctacggctccaccatcaccgtggacggcacggacgcttcgggcaacccc
atgaaggccacggcctccaagttccccgctgacgccacgcctgacaagcttgcgcaggct
tccatcggccagggcgacaccctgaacacgcctctgcagaacgcgatggtggcggccgcg
gtggccaacggcggcaagctcatgcagcccacgctggtggatcgggtgcgctcctccgac
ctgagtgtgctgagcgaaacctcgccctccatctactccgagcccttctcgcaagacacg
gccaaggcgctgaccaccatgatggaaggcgtggtaacgaaggactcgcccaacctgcag
attccgggcgcccaagtggctgccaaaaccggcaccgcgcagattggcctgaccaactcc
gccaacgacggctggactatcggcttcgcgccggcccagcagcccaagatagcgattgct
gtcgtcgtccactccacctcaacctacggcgctgcctccgcaggccctattatgaagcaa
gtgatgcaggaggcgctcaaatga
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integrated database retrieval system