Bombiscardovia nodaiensis: KIM372_03780
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Entry
KIM372_03780 CDS
T09715
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
bnk
Bombiscardovia nodaiensis
Brite
KEGG Orthology (KO) [BR:
bnk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bnk03016
]
KIM372_03780 (truA)
Enzymes [BR:
bnk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
KIM372_03780 (truA)
Transfer RNA biogenesis [BR:
bnk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KIM372_03780 (truA)
Prokaryotic type
KIM372_03780 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
BDR52471
LinkDB
All DBs
Position
524757..525884
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AA seq
375 aa
AA seq
DB search
MQAQMVRLRIDLAYDGSDFYGWARQPGLRTVQGELEGALRKVLHLARPAEHTSAGGASGG
QGQAEAESEAVASQVSTPNAGAEADAENADESTETGPWEPRLVVAGRTDTGVHAAQQVCH
LDIPQEILLLVVGHMDSEPALALERRLQHVLPFDIAVHSVTVAPKGFDARFSALERTYVY
RVCDNPARLDPRMRAFVLPVRHPLDIEAMNEAAAAAIGLHDFGSFATANEGGTTIRQVKY
AHWDRVPSNPLLHNPPQEGGEPSQAAGQVGTAYQVPAVESGLVCFTIVADAFAHNMVRSL
VNACLRVGQGKQSVHWFRQKLAQPVREGATGPVEARGLSLEHVSYPPADQLAERAQAIRA
KRSPAELVKPDGELQ
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggctcaaatggtcagactcagaattgaccttgcctacgacggcagtgatttctac
ggctgggcccggcagccaggtttgagaaccgttcaaggcgagcttgaaggggccttgcgc
aaggtgctccatctggcccgccctgctgagcatacatctgccgggggagcgtcaggaggc
cagggacaggccgaggctgagtctgaagccgtggctagtcaggtgagcacccctaatgcc
ggagcagaggctgacgctgagaacgctgacgaaagtactgagaccgggccttgggagcca
cgcctggtcgtcgcggggcggactgataccggggtccacgccgcccagcaggtctgccac
ctagatataccccaagaaatattgctcttggtggtggggcatatggacagtgagccggcc
ctggctttggaacgacgcttgcagcatgtgctccccttcgacattgcggtccactccgtt
accgtagcgccgaaaggctttgacgcccgcttttcggccctggagcgcacatacgtctac
cgggtctgcgacaaccccgctaggttggatccccgaatgagagcctttgtgctgcccgtc
cgccacccgctcgatattgaagccatgaacgaagcggcagctgcggctattggcttgcat
gacttcggctcgtttgccaccgcgaatgaaggcggtacgaccatacgccaggtgaagtat
gcccactgggatcgggtgcccagcaatccgctcctgcataatccgccccaagaggggggt
gagccgagtcaggcagctggccaagtgggcactgcctaccaggttccggctgtggagtca
ggtttggtctgtttcacgattgtggccgatgcctttgcccacaacatggtccgctctctg
gtcaatgcctgcctgcgagtgggccagggtaagcagagcgttcactggttccggcagaag
ctagcacagcccgtcagagagggcgctacggggcctgtggaggcccgtggactcagtttg
gaacatgtgtcctatccgccggccgatcagctggcagagcgggcacaggccatccgagcc
aagcgttctccagctgagctcgtcaagcctgatggcgagctacaatag
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