Bombiscardovia nodaiensis: KIM372_05470
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Entry
KIM372_05470 CDS
T09715
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
bnk
Bombiscardovia nodaiensis
Pathway
bnk03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bnk00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
KIM372_05470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bnk03019
]
KIM372_05470
03009 Ribosome biogenesis [BR:
bnk03009
]
KIM372_05470
Messenger RNA biogenesis [BR:
bnk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KIM372_05470
Ribosome biogenesis [BR:
bnk03009
]
Eukaryotic type
Pre-60S particles
RNases
KIM372_05470
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF6904
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
BDR52640
UniProt:
A0ABN6SCT2
LinkDB
All DBs
Position
732682..733395
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AA seq
237 aa
AA seq
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MAMADHKDEEVFTPEESRMIWIDCEMTGLDIFHDELCEVSVVPTDFNLKVLDKGIDLVIK
PSDEAVAQMNDFVRHMHTSSGLIDEWNESGLSLEDAQEQVVDYVKQFLPERGKAHLAGNS
VGSDKKFLDRYMPDLMDLLHYRVIDVSTLKELARRWYPAVYQNKPAKHGGHRALADIIES
ADELRYYRNMFFAPAPGPDAAAAQVGAQEVERTSLLRSYEEDGNPVEDASTPEKKDY
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggctatggctgaccataaggatgaggaagtgttcactcccgaagagtcgcggatgatt
tggattgactgcgagatgacgggcttggatattttccacgacgaactgtgcgaagtctcc
gtggtgcccaccgactttaacctgaaagtgctcgacaagggcatcgacctggtgattaag
ccctctgacgaagccgtggcgcaaatgaatgactttgtgcggcacatgcacacctcttcc
gggctgattgacgagtggaatgagtccggcctgtctctggaggacgcgcaggagcaagta
gtggactatgttaagcaattcctgcctgagcgcggcaaggcgcacctggctggtaattcg
gtcggttcggacaagaagttcctcgaccgctacatgcccgacctgatggacctccttcac
taccgggtgattgacgtctccaccttgaaggagctggcccgccgctggtacccggcagtg
tatcagaataagcccgccaagcacggcggtcacagggctttggctgacatcatcgagtcg
gccgacgagctacgctactaccggaatatgttcttcgccccggcccctggcccggacgct
gcagctgcccaggtgggcgctcaggaagtggagcgcacgtcgctcttgcgctcatacgag
gaggacggcaaccccgtggaggatgcttccacgccagagaagaaagattactaa
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