Bombiscardovia nodaiensis: KIM372_05670
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Entry
KIM372_05670 CDS
T09715
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
bnk
Bombiscardovia nodaiensis
Pathway
bnk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bnk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KIM372_05670
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bnk02000
]
KIM372_05670
Transporters [BR:
bnk02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
KIM372_05670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
BDR52660
LinkDB
All DBs
Position
756991..758769
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AA seq
592 aa
AA seq
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MSSSNEGVSGSSGTTPAPYAGSVQPGPSTDPILNQHLKAPKQGSPLPWKILSLVLAVALV
CSLWALSQAGKAASGGGQASAQPAQSMSIGLKLAPSNLDIRNQSGSALDQALVGNVYEGL
VTRDESNAVQPGLAKSWQVSADGKTYTFHLNSGMKFSNGDTLDADDVAWSISELMSRKYH
DAEQVRNFQAVRVLDPATVELKLSAPYASLLWVLAGRPGLVFDKDAKYDPKSQAIGSGPY
TVAAFVPNDSLTLKANPSYWGPHKAKTPTIYLRYMSDDNAAVNALRSHDIQVLAPITATL
AAPFKSDSAHYQVHVGQGTDKYVLAMNSKGSKTSDLRVRQAIRYAIDHGQLIASRGSTDL
ALGGPIPKLDPGYEDLTGLYPRNERKAQELMSAAGYSPARPLQLRLTYANTYGTELGDQL
RSQLKPIGIDLQVQVVEFSTWMQNVYTNHDYDLSLVDHSESHDFAQWTNPSYYYGYDSPK
VRELYQQAMAASSSQESNKLLAQAARQVSQDAPADWLLNYQISTAMLVGVHNFPLSLNQT
LLPLSRVYYTPDNAGTSSSSQSASAGPAASASVSRSDSGASAEPARLSGQRK
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtagtaacgagggcgtgtctggcagcagcgggacgaccccagcaccatacgct
gggtccgtgcagcctggtcccagtaccgatccaatcttaaatcagcatctgaaagcgccc
aagcaaggcagccctctgccctggaaaatactgtcgctggtgctcgccgtggccctggtc
tgctccctgtgggccttgagccaagctggcaaggctgcttcgggcggcggtcaagctagc
gctcagccagcccagtctatgagcattgggctcaaactcgcccccagtaatctggatatt
cgcaaccagtcgggctcggctctggaccaggcgctggttggcaacgtgtacgaggggttg
gtgacccgcgacgaatccaacgcggtccagcctgggctcgccaagagctggcaggtgagc
gctgacggcaagacctacaccttccacctcaactcaggcatgaagttctccaacggagac
accctagatgcggacgacgtggcctggtccatcagcgagctcatgagccgcaaataccac
gacgccgagcaggtgcgcaatttccaggcggtccgggtgctcgacccggctacggtggag
ctcaagctgagcgcgccctatgccagcctcttgtgggtgctggcgggcaggcctggcctg
gttttcgacaaagatgccaagtacgatcccaaatcgcaggccatcggctccggaccctat
accgtcgccgcgttcgtgcccaacgactctttgacgctcaaggccaacccaagctactgg
gggccgcacaaagccaagacgccgaccatctacctgcgctacatgtccgacgacaacgca
gcagtcaacgccctgcgctcgcacgatattcaggtgctggcgcccattaccgccacccta
gcggctcccttcaaatccgacagcgctcactaccaggtgcatgttgggcagggcaccgac
aaatatgtgcttgccatgaatagcaagggatccaagacgagcgacctgcgggtgcggcag
gccattcgctatgctatcgaccacggccagctgattgcctcccggggcagcaccgacctg
gccctaggcggtccgattcccaagctggaccctggctacgaggatttgaccggcctctac
ccccgcaacgagcgcaaggcccaagagctgatgagtgcggctggctacagcccggcccgc
cccttgcagctgaggttgacctacgccaacacctatggcactgagctgggcgaccagttg
cgctcgcagttgaagcccattggcattgacctgcaagtgcaagtggtggagttctccacc
tggatgcaaaacgtttacaccaaccacgactacgacctctccctggtggatcattcggag
agccacgactttgcccagtggactaatccctcctattactacggctacgacagcccgaag
gtgcgggagctctaccagcaggcgatggcggcttctagttcccaggagagcaacaagctc
ttggcccaagctgctaggcaggtctcccaagacgcgcccgctgactggctgctgaactac
caaatttcgacggccatgctggtaggcgtgcacaacttccccctctcgctcaaccagacg
ctcctgccgctctcgcgcgtctattacacgcccgacaacgcaggaactagctccagcagc
cagagcgcaagcgcgggcccagctgcttcggccagcgtcagcaggtcggattcgggtgcc
tcagccgagcctgcccggctcagcgggcagagaaaatag
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