Bombiscardovia nodaiensis: KIM372_06370
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Entry
KIM372_06370 CDS
T09715
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large chain
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
bnk
Bombiscardovia nodaiensis
Pathway
bnk00220
Arginine biosynthesis
bnk00240
Pyrimidine metabolism
bnk00250
Alanine, aspartate and glutamate metabolism
bnk01100
Metabolic pathways
bnk01110
Biosynthesis of secondary metabolites
bnk01240
Biosynthesis of cofactors
Module
bnk_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
bnk00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
KIM372_06370 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
KIM372_06370 (carB)
00220 Arginine biosynthesis
KIM372_06370 (carB)
Enzymes [BR:
bnk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
KIM372_06370 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_3
ATP-grasp_2
ATP-grasp_5
CoA_binding_2
RimK
Motif
Other DBs
NCBI-ProteinID:
BDR52730
LinkDB
All DBs
Position
830036..833401
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AA seq
1121 aa
AA seq
DB search
MPKRTDLHSVMVIGSGPIVIGQAAEFDYSGTQACRVLKEEGIRVILVNSNPATIMTDPQM
ADATYIEPIDTAILERIIAKERPDALLPTLGGQTALNAAEQLGKAGILDRYHVELIGASL
EAIDRGEDRERFKQVVAQAGAQSARSAVAHSLPEADRVAEQLGYPLVVRPSFTMGGLGSG
IAHNEEELHRIAGAGIHYSPTDEVLLEEGIEGWKEYELELMRDRKDNVVVVCPIENVDPV
GVHTGDSVTVAPVFTLTDREYQRMRDIGIAIIRGVGVDTGGCNIQFAVNPDNGRIIVIEM
NPRVSRSSALASKATGFPIAKIATKLALGYTLDEIDNDITRSTPASFEPTIDYVVTKVPR
FAFEKFPGADDTLTTSMKSVGEAMALAGSFPESLGKAMRSLDKRHMVFSWNGPQPARPQV
QELLQAMRRPTPGRYLQIQQAFWGGASVDEVFQATKIDPWFLEEISAINRTALEVRAADF
VDDQLMLQAKQAGLSDLQIAHLRGLGDQGELVIRELRWNYGIRPVYKTVDTCAAEFDALT
PYYYSTYAEESELKPRQREAVIILGSGPNRIGQGVEFDYTCVHAVQELGQDYDTIMVNCN
PETVSTDYDMSDRLYFEPLTFEDVLEIYRAELQMGPVKGVIVQLGGQTPLSLAARLKAAG
VPILGTSPESIDLAENRELFGQVLKEEGLNAPRYGTALSLLEAQEAAHSIGYPVLVRPSY
VLGGRGMEIVYDDAQLGKYVNRALEQAQADTVVSGRLPSPLLIDKFLQDAIEIDVDALYD
GSQLYIGGIMEHVEEAGVHSGDASCTLPPSTLSDDQIDRLRAATLAIARGCGVRGLINVQ
FAFMANTLYVIEANPRASRTVPFASKATGTALAKAAARIMLGESVDQQRARGLLLPQLDG
SVSRPGQPVAVKEAILPFKRFRTPVGQSVDVLLGPEMRSTGEVMGFDRDFPHAFAKGQLA
AYQGGLPTSGMVFLSVNDTDKRQLPMIASRLHELGFTICATQGTASVLRRYGIDVALVGK
ISEGSGGADASGHGPDRLGANVVELIEQGKIDMVLNSPSTRDSRSDGYLIRAAAVAADLP
QFTTVTQFAAVLMAIEAVKAGDYQVMSIQERAQRLFQELGQ
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagcgcacagatttacactcggtgatggttattggttcaggtccgattgtgatt
ggccaggccgccgaatttgactactcgggtacccaggcctgccgggttctgaaagaagag
gggattcgcgtcattctggtcaattccaacccggccaccattatgaccgacccgcagatg
gccgatgccacctacattgaacccatcgataccgccattttggagcgcattattgccaag
gaacgcccggacgccctcctgccaactttgggcggacagacagccctcaacgctgctgag
cagctgggcaaggccggcatcttggaccgctaccatgttgagctgattggtgcctccctg
gaagccatcgaccggggtgaggaccgggagcgctttaagcaggtggtggcgcaggccggt
gcacaatccgcgcgatccgccgttgcccacagcctaccagaggcggatcgagtagctgag
cagctgggctacccgcttgtggtgcgccccagtttcaccatgggcggcctgggctctggc
atagcccacaatgaggaagagctccaccgcatcgccggtgcgggcatccactattcaccc
acggacgaggtcttgcttgaggagggcattgaaggctggaaggagtacgagcttgagctc
atgcgcgaccgcaaggacaacgtggtggtggtctgccctattgagaacgtggatccggtg
ggcgtgcacaccggcgactcggtgacggtagcgcccgtctttacgctgaccgaccgcgaa
taccagcggatgcgagacattggcatcgccattatccgcggcgtgggcgtggacaccggc
ggctgcaatatccagttcgctgtcaaccctgacaacggtcgcattatcgtcatcgaaatg
aacccgcgtgtctcccgctcctcggccctggcctccaaggcgaccggcttccccatagcg
aaaatcgccacgaagctggccctgggctacaccttggacgagattgacaacgatatcact
cgctccactcccgcctccttcgagcccacgattgactacgtggtgacgaaggtgccgcgc
ttcgccttcgaaaagttccccggcgcggacgacaccttgaccacctctatgaagtcggtg
ggggaggccatggccctagctggctccttcccagagtcgctaggcaaggccatgcgctcg
ctcgacaagcgccacatggtcttctcctggaacggcccgcagcccgctcgcccgcaggtt
caggagctcttgcaggcaatgcgccggccaaccccgggccgctacttgcagattcagcag
gccttctggggcggtgcgagcgtggacgaggtcttccaagccacgaagattgacccctgg
tttttggaggaaatcagcgccattaatcgcacggccctagaggtgcgggcggccgatttt
gtggacgaccagctcatgctccaggccaagcaggctggcctgtctgacctgcaaattgcc
cacttgcgcggcctgggcgaccagggtgagctcgtcatccgcgagctgcgttggaattac
ggcattcgaccggtctacaagactgtggacacctgcgctgccgaattcgacgcgctcact
ccttattactactccacctacgccgaggagagcgagctcaagccccgccagcgcgaggcc
gtcatcattctgggttcgggccccaaccgcattggccagggcgtggagtttgactacact
tgcgtgcacgccgtgcaggagctggggcaggactacgacacgattatggtcaactgcaac
ccggagaccgtctccaccgattacgacatgtccgaccgcctttacttcgagccgctgacc
tttgaggacgtgcttgaaatctacagggctgagctccagatggggccggtcaagggggtt
attgtgcagctgggagggcagacgccgctctcgctcgcggccaggctcaaggctgccgga
gtgccgattttgggtacgagtcccgagtcgattgacctggcggagaaccgggagctcttc
ggccaggtgctcaaggaggaaggcctcaacgcccctcgctacggcacggccctctccctg
ctagaagcccaggaggcggcgcacagcattggctacccggtcctggttcgcccctcgtat
gtgctcggcgggcggggcatggagatagtctacgacgacgcccagctgggcaagtacgtc
aatcgcgctctggagcaagcccaggctgacaccgtggtgtcgggccgcctgccctcgccg
ctcctgattgacaagttcctgcaagatgccatcgaaatcgacgtggacgcgctctacgac
ggctcccagctctacattggcgggattatggagcacgttgaggaggccggagttcactcg
ggagatgcctcctgcaccctgccgccctccacgctctcggacgaccagatagaccgcctg
cgcgcagccacgctcgccatcgccaggggctgcggggtgcggggcttaatcaacgtgcag
ttcgcgtttatggcgaacacgctctatgtgattgaggccaacccccgcgcctcccgcacg
gtacccttcgcttccaaggccacgggcacggctctggcgaaggcggcagcccgcatcatg
ctgggggagagcgtggaccagcagagggctcgcggcttgctcctgccccagctcgacggg
tcggtcagccgtcctgggcagccggtggcagtcaaggaagccatactgccctttaagcgc
tttaggacgcccgtgggccagagcgtggacgtgctcctggggcccgagatgcgctctacg
ggcgaggtgatgggctttgaccgcgacttcccgcacgcctttgccaagggccagctcgcc
gcctaccagggagggctgcccacgtcgggtatggttttcctctcggtcaacgacaccgac
aaacgccagctgcccatgattgccagccgcctgcacgagctcggattcaccatctgcgcc
acccagggcacggcttcggtcctgaggcgctacgggattgacgtggcgctggtgggcaag
attagcgagggttcgggcggcgcagatgcttccggccacggccctgaccgcctgggggcc
aatgtggtggagctgattgagcaaggcaagattgacatggtgctcaactcgccctctacc
cgcgattcgcgctctgacggctacctgattcgcgccgcagccgtggccgccgacctgccc
cagttcacgaccgtcacccagttcgcagccgtgctcatggccattgaagctgtcaaggcg
ggcgactaccaggtcatgagcatccaagagcgggcccagcgcctctttcaggagttgggg
cagtag
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