Bombiscardovia nodaiensis: KIM372_07080
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Entry
KIM372_07080 CDS
T09715
Symbol
pdhD
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
bnk
Bombiscardovia nodaiensis
Pathway
bnk00010
Glycolysis / Gluconeogenesis
bnk00020
Citrate cycle (TCA cycle)
bnk00260
Glycine, serine and threonine metabolism
bnk00280
Valine, leucine and isoleucine degradation
bnk00310
Lysine degradation
bnk00380
Tryptophan metabolism
bnk00620
Pyruvate metabolism
bnk00630
Glyoxylate and dicarboxylate metabolism
bnk00640
Propanoate metabolism
bnk00670
One carbon pool by folate
bnk00785
Lipoic acid metabolism
bnk01100
Metabolic pathways
bnk01110
Biosynthesis of secondary metabolites
bnk01120
Microbial metabolism in diverse environments
bnk01200
Carbon metabolism
bnk01210
2-Oxocarboxylic acid metabolism
bnk01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
bnk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
KIM372_07080 (pdhD)
00020 Citrate cycle (TCA cycle)
KIM372_07080 (pdhD)
00620 Pyruvate metabolism
KIM372_07080 (pdhD)
00630 Glyoxylate and dicarboxylate metabolism
KIM372_07080 (pdhD)
00640 Propanoate metabolism
KIM372_07080 (pdhD)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
KIM372_07080 (pdhD)
00280 Valine, leucine and isoleucine degradation
KIM372_07080 (pdhD)
00310 Lysine degradation
KIM372_07080 (pdhD)
00380 Tryptophan metabolism
KIM372_07080 (pdhD)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
KIM372_07080 (pdhD)
00670 One carbon pool by folate
KIM372_07080 (pdhD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bnk04147
]
KIM372_07080 (pdhD)
Enzymes [BR:
bnk01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
KIM372_07080 (pdhD)
Exosome [BR:
bnk04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
KIM372_07080 (pdhD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox
Pyr_redox_dim
Pyr_redox_3
FAD_oxidored
DAO
FAD_binding_2
NAD_binding_8
GIDA
Thi4
XdhC_C
HI0933_like
Lys_Orn_oxgnase
FAD_binding_3
Lycopene_cycl
ApbA
Motif
Other DBs
NCBI-ProteinID:
BDR52801
LinkDB
All DBs
Position
complement(915129..916652)
Genome browser
AA seq
507 aa
AA seq
DB search
MPLALPMIEGMTAQASEQTISSTQHDQAESSFDLVIIGSGPGGYSTALRAAQLGLSVAVV
ERDAVVGGTCLNRGCIPTKALMTATSTITQAAHARQLGIQSTFEGIDFDRLNAFKQESID
AMTGGLHQLLQARKVTLIQGQAAISGPGQVTVETLAGSSRQLSARHIVLATGARSTPLAG
LPFSNRVLDSDRALNLERFPQRPVIFGAGAVAVEFASIWQAAGSQVTLVIRKDRVLSSWD
RRTSLTLTRELGKQGISVVTGSQFSSLEQADENADMKVSYEPVDAASGRGSSASLETDAV
LVAIGRSPNTDASWLTQAGVELDAHGLVTIDPWGRTSADRIWALGDITAGYHFAHRAFEQ
GIVIAETIAGLNPQPVNEATIPQVVFSTPQAACVGYSKQAAQEREDLNQVQETVYPMLSN
ARMRMSGQGGSLSLVTACASDQPDTRIVVGVNLVAPEAAELIAEAEQIVGNRLPLSQAAR
LIHPHPTFSETLGEALLKADGRPLNMR
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
ttgccgctcgctctgcctatgatagagggtatgacagcacaggcgagcgagcaaaccatt
tcaagcacacaacatgaccaagccgaaagctctttcgacttggtcattattggatccggc
cccggcggctattctacggccctgagggcggcccaactgggactgagcgtggcggtcgtt
gaacgcgatgccgtcgtcggtggcacctgcctgaaccgggggtgcatccccaccaaggcg
ctcatgaccgccacctcaacgattacccaggccgctcacgcccggcagctcggcattcaa
tctaccttcgaaggcattgattttgaccgcctcaacgctttcaagcaggagagcattgac
gctatgactggcggcctgcaccagctcctgcaggcccgcaaggtcacgctcattcaaggc
caggcagctattagcggccctgggcaagtcactgtcgagaccctggcagggtccagccgc
cagctcagcgcccgccatatcgttctcgctactggtgcccgctccacccccctggccggt
ctgccctttagcaatcgggtcttggattcggaccgcgccctcaatcttgagcgcttcccc
cagcggcccgtgattttcggcgccggagcggtagctgtggagttcgcctccatctggcag
gccgctggttcacaggtgaccctggtcatccgcaaggaccgtgtgctctccagctgggac
aggcgcaccagcctgacactgacccgcgagctaggcaagcagggcatcagcgtagtcact
ggctcccagttctcctccctcgagcaggcagacgagaacgcggatatgaaggtctcctat
gagccggttgacgccgcctctggacgcggcagctccgctagccttgaaaccgacgcggta
ctcgtagccattggccgcagcccgaataccgatgccagctggctgacccaggcaggtgtg
gaacttgacgcacacggcctggtgaccatcgacccctggggccgtaccagcgccgaccgc
atctgggccctgggcgacatcaccgctggctaccactttgcccaccgcgcctttgagcag
ggcatcgtcattgccgaaactatcgcaggccttaacccccaaccggtgaacgaggccacc
atcccccaggtggtcttctccaccccgcaggccgcttgcgttggctacagcaagcaggcc
gcccaagagagggaagacttgaaccaagtgcaagagacagtctaccccatgctctccaac
gcccgtatgcgcatgagcggccagggtggctccttgagtctagtgactgcctgcgctagc
gaccaaccagacacgcgcatcgtggtaggcgtgaacctagtggcacccgaggccgccgag
ctcatagcggaagctgagcagattgtgggcaaccgcctacccctgagccaggcggcccgt
ctcatccacccccaccccaccttcagcgaaaccctgggcgaggcactcttgaaggccgac
ggtcgcccgctcaatatgcgctag
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