Bombiscardovia nodaiensis: KIM372_10960
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Entry
KIM372_10960 CDS
T09715
Symbol
dppD
Name
(GenBank) ABC transporter ATP-binding protein
KO
K10823
oligopeptide transport system ATP-binding protein
K15583
oligopeptide transport system ATP-binding protein
Organism
bnk
Bombiscardovia nodaiensis
Pathway
bnk01501
beta-Lactam resistance
bnk02010
ABC transporters
bnk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bnk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
KIM372_10960 (dppD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KIM372_10960 (dppD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KIM372_10960 (dppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bnk02000
]
KIM372_10960 (dppD)
Transporters [BR:
bnk02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
KIM372_10960 (dppD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
AAA_29
AAA_16
nSTAND3
DUF3987
RsgA_GTPase
ABC_ATPase
nSTAND1
ATP-synt_ab
AAA_5
DUF87
Mg_chelatase
Sigma54_activat
APS_kinase
NACHT
G-alpha
NPHP3_N
AAA_10
PPC
Motif
Other DBs
NCBI-ProteinID:
BDR53189
LinkDB
All DBs
Position
complement(1366200..1368221)
Genome browser
AA seq
673 aa
AA seq
DB search
MSEKTVEESMKAKLAQVQVADGPLLDVTDLQVDFTADGHSVHAVRDASFNVYPGQWVAIV
GESGSGKSTSAMAVLGLLPGTGKVIGGSIKLHGKELVGLSRKDYEDIRGKEMGLVPQDPM
SNLNPVWRIGTQVKEALVANHMDISREKRSQLAKMLASSEDVTLKSQDDELFIASKDLPE
LLKAAEQAVTAAGKSDPAKAMEHFKSEWDPGSETRWGVAKDLIEAGVSDDDAWAIAKHYV
NGSDMTDRIAGLLSEAGLPDAATRARQFPHEFSGGMRQRALIAMGLASRPDLLIADEPTS
ALDVTVQKKILDHLQGLTDSLGTAVLFITHDLGLAAERAQHIVVMYKGRVVESGPSLDVL
QHPQHPYTKRLVEAAPSLASQRIISAKEHGQDAESLMEHHVKGEQTLEKSEHIIAVEHLT
REFRLPRKKELFKAVDDVSFSVKRGTTLAIVGESGSGKSTVANMVLHLLKPSSGKVIYEG
KNTSGFGSHELLDFRRHVQPVFQNPYGSLDPMYSIYRSIEEPLRIHGIGDKKSRRNRVKD
LLEMVEMPASVMGRYPNELSGGQRQRIAIARAMALNPDVIICDEAVSALDVLVQDQVLRL
LNDLQAEQGLSYLFITHDLAVVRQIADEVVVMQHGKLVEHATTDEVFDHPQQQYTQDLLD
AIPGGKLSLGLGN
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagaaaactgtagaagagtcaatgaaagccaagttggctcaggttcaggttgca
gatggccccctgctcgacgttacggatttacaggtggactttacggcagacggccattca
gtccacgcggtcagggacgcatcatttaatgtgtatccgggccagtgggtggctatcgtc
ggtgagtccggttcgggcaagtcgacgtcggctatggctgtgctgggcctcctgcctggc
accggcaaggtgattggtggttccatcaagctccacggtaaggagctggtgggcttaagc
cgcaaggactacgaagatattcgtggcaaggagatgggcctggttcctcaggatcccatg
agcaaccttaacccggtgtggcgcattggcacacaggtgaaggaagccctagtagccaac
cacatggatatcagtcgcgagaagcgttcacagctggccaagatgttggcctcatccgaa
gatgtgaccctgaagagccaagacgacgagctctttattgcatctaaggatctgcctgaa
ctgcttaaggcggcagagcaggcagtcacagcagcaggcaaaagcgacccagccaaggcc
atggagcacttcaagtctgagtgggatccaggttcggagacccgctggggcgtggccaag
gacttgattgaggcaggtgttagcgacgacgacgcttgggctattgccaagcactacgtc
aacggttcagatatgactgaccgcatcgctggcttgctctccgaggctggtctgcccgat
gcggccacccgtgcccgccagttcccgcatgagttctccggtggtatgcgtcagcgtgct
ttgatcgctatggggctggcatcgcgcccggatctgctgattgcggacgagcccacctca
gctctggatgtgaccgttcaaaagaagattctggaccatttgcagggacttacagactcc
ttgggcactgccgtgcttttcatcacccacgatttgggcttggctgccgagcgcgcccag
cacattgtggtgatgtacaagggacgagtcgttgagtcaggtccgagcctggatgtgctc
cagcacccccagcacccctataccaagcgactggttgaggctgcaccttctttggcttcg
cagcgtattatctcggccaaggagcatggtcaggacgctgagagcttgatggagcaccat
gtcaagggtgaacaaactctggagaaaagtgagcacatcattgccgttgagcacctgacc
cgggagttcaggcttccgcgtaagaaggagctcttcaaggctgtggatgatgtctccttc
tcggtcaagcgcggcaccaccctggcaattgtgggcgagtcgggttccggcaagtccaca
gtggcgaatatggtgcttcacctgttgaagccttcctcaggcaaggtgatatatgagggc
aagaatacatccgggttcggttcacacgagcttttagacttcaggcgacacgtacagcct
gtcttccagaacccatatggctctttggaccccatgtattccatctatcgctctattgag
gagccgctgcgcatccacggtattggcgataagaagtcacgccgcaacagggtgaaggac
ctgctggaaatggtagagatgcctgcgtcggtcatgggacgctaccccaatgagctttca
ggcggccagcggcagcgtattgctatcgctcgagctatggccttgaaccccgacgtgatt
atctgcgacgaggccgtgtcagctctcgatgtgttggtacaagaccaggtcttgcgcctg
ctcaacgacttgcaggctgagcagggtctgagctacttgttcataacccacgatttggct
gtggtccggcagattgccgacgaggttgtggttatgcagcacggcaagctcgtggagcat
gctacaacggatgaggtcttcgaccatccgcagcagcagtacactcaggacttgctcgat
gctattcctggtggcaagctgagcctagggctcggcaactaa
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