Bombiscardovia nodaiensis: KIM372_11290
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Entry
KIM372_11290 CDS
T09715
Symbol
sigH
Name
(GenBank) RNA polymerase sigma factor RpoE
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
bnk
Bombiscardovia nodaiensis
Brite
KEGG Orthology (KO) [BR:
bnk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bnk03021
]
KIM372_11290 (sigH)
Transcription machinery [BR:
bnk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KIM372_11290 (sigH)
BRITE hierarchy
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_28
Phage_antitermQ
GerE
Motif
Other DBs
NCBI-ProteinID:
BDR53222
LinkDB
All DBs
Position
complement(1399800..1400438)
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AA seq
212 aa
AA seq
DB search
MELGERKKRFEQLAMPAVDVLYRQAMKLTNNPEDAQDLVQDTFERGFKAFDRFEPGSNFE
AWMTTIERNAFFNQYHKAKRRPQRANDSTGEYNDWDIYSASEHTSEGLKSAEQEYLETFA
PEEIMAALNKLSPERRRVFIDAAIDGKSYQQVADEQGIKIGTVMSRLNRARTQLKDELKK
YAAERGYGLESSSGGVRPELEAGVSGGPEDSS
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggagcttggtgagcgcaagaagcgcttcgagcagctcgctatgcccgcggttgacgtt
ttgtaccggcaggctatgaagctgacgaataaccctgaagacgcgcaggacctggtgcaa
gacaccttcgagcgcggttttaaggcctttgaccggtttgagccgggcagcaacttcgaa
gcctggatgaccacgatagaacgtaacgctttctttaatcaatatcacaaggccaagcgg
cgcccccaacgcgcgaatgactcgaccggtgaatacaacgactgggacatttattctgct
tccgagcatacatcagagggcttaaaatctgccgagcaggagtatttggagaccttcgcg
cccgaagaaattatggcggcgctcaacaagctgagcccggagcggcggcgggtctttatc
gacgcggccattgacggcaaatcttaccagcaggtggccgacgagcaggggattaagatt
ggaacggtcatgagccggctcaaccgcgccaggactcagctcaaggacgaactcaaaaag
tacgcggctgaacgcggctacgggcttgagagcagttcgggcggggtcaggccagagctc
gaagcgggagtatcgggcggcccggaggacagctcgtga
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integrated database retrieval system
